Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 AL096828.3-201ENST00000615354 462 ntBASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 CICP17-201ENST00000418553 2377 ntBASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 AC007952.5-201ENST00000572818 1486 ntBASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
POLR1DQ9Y2S0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 AC004899.1-201ENST00000424687 1714 ntBASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 KRT18P15-201ENST00000458108 1291 ntBASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 FAM86HP-204ENST00000513466 959 ntBASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 LINC00115-201ENST00000473798 1317 ntBASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR1DQ9Y2S0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR1DQ9Y2S0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms