Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 AC002044.2-201ENST00000624910 970 ntBASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMG20BQ9P0W2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 AC093462.1-201ENST00000621167 1683 ntBASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 PES1P2-201ENST00000449745 1735 ntBASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 AC025186.1-201ENST00000478174 870 ntBASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 CTBP2P4-201ENST00000513884 920 ntBASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 RN7SKP155-201ENST00000516031 288 ntBASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMG20BQ9P0W2 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 FMO6P-201ENST00000236166 1620 ntBASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 PIN4P1-201ENST00000451079 396 ntBASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 AL132780.4-201ENST00000624870 1135 ntBASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 AL365209.1-201ENST00000624418 6473 ntBASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMG20BQ9P0W2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms