Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 ACTBP14-201ENST00000411655 1089 ntBASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 FAM21EP-201ENST00000417804 985 ntBASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 FAM86KP-201ENST00000509817 987 ntBASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 AP000769.1-203ENST00000637245 208 ntBASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNGAP1Q96PV0 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 LINP1-201ENST00000417112 917 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 EEF1DP2-201ENST00000433698 843 ntBASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 AC083801.1-201ENST00000491689 358 ntBASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 F11R-204ENST00000537746 1245 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 ZNF436-AS1-201ENST00000335648 2547 ntBASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
SYNGAP1Q96PV0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNGAP1Q96PV0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SYNGAP1Q96PV0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNGAP1Q96PV0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNGAP1Q96PV0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SYNGAP1Q96PV0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNGAP1Q96PV0 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNGAP1Q96PV0 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SYNGAP1Q96PV0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNGAP1Q96PV0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms