Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 RNA5SP412-201ENST00000516234 123 ntBASIC13.03□□□□□ -0.32
HPS1Q92902 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.03□□□□□ -0.32
HPS1Q92902 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.03□□□□□ -0.32
HPS1Q92902 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.03□□□□□ -0.32
HPS1Q92902 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.03□□□□□ -0.32
HPS1Q92902 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.03□□□□□ -0.32
HPS1Q92902 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.03□□□□□ -0.32
HPS1Q92902 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.03□□□□□ -0.32
HPS1Q92902 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.03□□□□□ -0.32
HPS1Q92902 AC112220.4-201ENST00000604982 1263 ntBASIC13.03□□□□□ -0.32
HPS1Q92902 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.03□□□□□ -0.32
HPS1Q92902 AL109924.4-201ENST00000623089 670 ntBASIC13.03□□□□□ -0.32
HPS1Q92902 AL033527.4-201ENST00000641026 673 ntBASIC13.03□□□□□ -0.32
HPS1Q92902 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.03□□□□□ -0.32
HPS1Q92902 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 DDX12P-201ENST00000432996 2947 ntBASIC13.03□□□□□ -0.32
HPS1Q92902 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.03□□□□□ -0.32
HPS1Q92902 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.03□□□□□ -0.32
HPS1Q92902 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.03□□□□□ -0.32
HPS1Q92902 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HPS1Q92902 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HPS1Q92902 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
HPS1Q92902 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
HPS1Q92902 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
HPS1Q92902 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
HPS1Q92902 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
HPS1Q92902 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
HPS1Q92902 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
HPS1Q92902 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HPS1Q92902 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.02□□□□□ -0.32
HPS1Q92902 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HPS1Q92902 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
HPS1Q92902 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HPS1Q92902 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
HPS1Q92902 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
HPS1Q92902 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 AC099521.2-201ENST00000619354 2036 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HPS1Q92902 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC13.02□□□□□ -0.33
HPS1Q92902 ACKR1-201ENST00000368121 1240 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
HPS1Q92902 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.02□□□□□ -0.33
HPS1Q92902 BAATP1-201ENST00000412284 1225 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 FAM21FP-201ENST00000426241 1131 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 GHSR-202ENST00000427970 912 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 RPL7P3-201ENST00000441388 714 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 CT45A11P-201ENST00000448043 1134 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 AL353718.1-201ENST00000451028 517 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.02□□□□□ -0.33
HPS1Q92902 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
HPS1Q92902 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.02□□□□□ -0.33
HPS1Q92902 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC13.02□□□□□ -0.33
HPS1Q92902 AP001889.1-201ENST00000525414 633 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.02□□□□□ -0.33
HPS1Q92902 AC135782.3-201ENST00000562782 2105 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.02□□□□□ -0.33
HPS1Q92902 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.02□□□□□ -0.33
HPS1Q92902 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.02□□□□□ -0.33
HPS1Q92902 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
HPS1Q92902 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 AC090506.2-201ENST00000624521 419 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC13.02□□□□□ -0.33
HPS1Q92902 MAPK10-262ENST00000641051 5738 ntBASIC13.02□□□□□ -0.33
HPS1Q92902 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.02□□□□□ -0.33
HPS1Q92902 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
HPS1Q92902 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
HPS1Q92902 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.02□□□□□ -0.33
HPS1Q92902 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HPS1Q92902 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms