Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 KRT8P19-201ENST00000551916 1455 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 ELK2AP-201ENST00000392510 1007 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 PPP1R2P4-201ENST00000424051 595 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 PDIA3P2-201ENST00000428073 158 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 RPSAP15-201ENST00000448168 861 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 RN7SL769P-201ENST00000469386 295 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 AC020922.3-201ENST00000595064 547 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 LINC01783-202ENST00000614408 828 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 BX284668.2-205ENST00000619677 828 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 AL122018.1-201ENST00000446607 2310 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 AL137784.3-201ENST00000623858 2288 ntBASIC12.68□□□□□ -0.38
ATG4DQ86TL0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATG4DQ86TL0 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 AF013593.1-201ENST00000458074 1487 ntBASIC12.67□□□□□ -0.38
ATG4DQ86TL0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 MIR645-201ENST00000385283 94 ntBASIC12.67□□□□□ -0.38
ATG4DQ86TL0 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.67□□□□□ -0.38
ATG4DQ86TL0 STK33P1-201ENST00000423835 1218 ntBASIC12.67□□□□□ -0.38
ATG4DQ86TL0 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 AL161670.2-201ENST00000557650 1227 ntBASIC12.67□□□□□ -0.38
ATG4DQ86TL0 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 KRT8P18-201ENST00000413425 1445 ntBASIC12.67□□□□□ -0.38
ATG4DQ86TL0 KRT8P31-201ENST00000504812 1408 ntBASIC12.67□□□□□ -0.38
ATG4DQ86TL0 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 TBC1D27-202ENST00000424239 1573 ntBASIC12.67□□□□□ -0.38
ATG4DQ86TL0 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 MIR497HG-202ENST00000572453 3838 ntBASIC12.67□□□□□ -0.38
ATG4DQ86TL0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms