Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ATP7AQ04656 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ATP7AQ04656 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 TUBB8P5-201ENST00000445286 1351 ntBASIC19.93■□□□□ 0.78
ATP7AQ04656 SERPINB8P1-201ENST00000401898 377 ntBASIC19.93■□□□□ 0.78
ATP7AQ04656 AC004910.1-201ENST00000433493 787 ntBASIC19.93■□□□□ 0.78
ATP7AQ04656 PTPA-219ENST00000435305 530 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP7AQ04656 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC19.93■□□□□ 0.78
ATP7AQ04656 HCG18-241ENST00000602290 821 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP7AQ04656 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP7AQ04656 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC19.93■□□□□ 0.78
ATP7AQ04656 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 TUBA3GP-201ENST00000410028 1325 ntBASIC19.93■□□□□ 0.78
ATP7AQ04656 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP7AQ04656 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 AC106872.9-201ENST00000512437 1393 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP7AQ04656 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 MIR181D-201ENST00000384853 137 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 MKL1-204ENST00000402630 747 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 RNA5SP407-201ENST00000410275 110 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC19.92■□□□□ 0.78
ATP7AQ04656 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC19.92■□□□□ 0.78
ATP7AQ04656 DERL1-204ENST00000519018 575 ntTSL 4 BASIC19.92■□□□□ 0.78
ATP7AQ04656 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC19.92■□□□□ 0.78
ATP7AQ04656 AC063924.1-201ENST00000546680 673 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 PPY-202ENST00000587006 431 ntTSL 3 BASIC19.92■□□□□ 0.78
ATP7AQ04656 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP7AQ04656 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 AL137077.2-201ENST00000635124 1608 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
ATP7AQ04656 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ATP7AQ04656 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 FKBP4P1-201ENST00000507284 1347 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 AC106785.2-201ENST00000564385 1319 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ATP7AQ04656 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP7AQ04656 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP7AQ04656 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
ATP7AQ04656 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP7AQ04656 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
ATP7AQ04656 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ATP7AQ04656 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ATP7AQ04656 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ATP7AQ04656 NAA10-205ENST00000393712 908 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP7AQ04656 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC19.92■□□□□ 0.78
ATP7AQ04656 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP7AQ04656 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC19.92■□□□□ 0.78
ATP7AQ04656 AC015818.3-201ENST00000583797 589 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC19.92■□□□□ 0.78
ATP7AQ04656 AC136475.9-201ENST00000605240 497 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 AC009118.3-201ENST00000622896 873 ntBASIC19.92■□□□□ 0.78
ATP7AQ04656 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP7AQ04656 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
ATP7AQ04656 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP7AQ04656 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP7AQ04656 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ATP7AQ04656 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ATP7AQ04656 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
ATP7AQ04656 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP7AQ04656 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP7AQ04656 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms