Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
SUMO3P55854 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.63□□□□□ -0.39
SUMO3P55854 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.63□□□□□ -0.39
SUMO3P55854 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.62□□□□□ -0.39
SUMO3P55854 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.62□□□□□ -0.39
SUMO3P55854 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.62□□□□□ -0.39
SUMO3P55854 PCDHA5-203ENST00000614258 4248 ntBASIC12.62□□□□□ -0.39
SUMO3P55854 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.62□□□□□ -0.39
SUMO3P55854 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 AC040160.2-201ENST00000623816 1675 ntBASIC12.62□□□□□ -0.39
SUMO3P55854 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SUMO3P55854 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 RPL3P2-204ENST00000413027 1203 ntBASIC12.62□□□□□ -0.39
SUMO3P55854 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.62□□□□□ -0.39
SUMO3P55854 MAGEA5-201ENST00000446757 942 ntBASIC12.62□□□□□ -0.39
SUMO3P55854 AC022494.1-201ENST00000466044 728 ntBASIC12.62□□□□□ -0.39
SUMO3P55854 AC130709.1-201ENST00000484779 1212 ntBASIC12.62□□□□□ -0.39
SUMO3P55854 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.62□□□□□ -0.39
SUMO3P55854 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SUMO3P55854 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.62□□□□□ -0.39
SUMO3P55854 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.62□□□□□ -0.39
SUMO3P55854 MIR3907-201ENST00000579424 151 ntBASIC12.62□□□□□ -0.39
SUMO3P55854 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.62□□□□□ -0.39
SUMO3P55854 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.62□□□□□ -0.39
SUMO3P55854 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.62□□□□□ -0.39
SUMO3P55854 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.62□□□□□ -0.39
SUMO3P55854 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.62□□□□□ -0.39
SUMO3P55854 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SUMO3P55854 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SUMO3P55854 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SUMO3P55854 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SUMO3P55854 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
SUMO3P55854 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 RCC2P5-201ENST00000492126 1487 ntBASIC12.61□□□□□ -0.39
SUMO3P55854 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.61□□□□□ -0.39
SUMO3P55854 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SUMO3P55854 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 GUSBP10-201ENST00000417412 665 ntBASIC12.61□□□□□ -0.39
SUMO3P55854 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.61□□□□□ -0.39
SUMO3P55854 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 AL627422.1-201ENST00000434104 580 ntBASIC12.61□□□□□ -0.39
SUMO3P55854 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.61□□□□□ -0.39
SUMO3P55854 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
SUMO3P55854 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
SUMO3P55854 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.61□□□□□ -0.39
SUMO3P55854 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.61□□□□□ -0.39
SUMO3P55854 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.61□□□□□ -0.39
SUMO3P55854 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms