Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.3■□□□□ 0.04
CPT1AP50416 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CPT1AP50416 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.3■□□□□ 0.04
CPT1AP50416 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.3■□□□□ 0.04
CPT1AP50416 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 AC064850.1-201ENST00000413279 1398 ntBASIC15.3■□□□□ 0.04
CPT1AP50416 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC15.3■□□□□ 0.04
CPT1AP50416 AL137244.1-201ENST00000422931 865 ntBASIC15.3■□□□□ 0.04
CPT1AP50416 CDCA4P4-201ENST00000435216 680 ntBASIC15.3■□□□□ 0.04
CPT1AP50416 ZNF877P-201ENST00000437614 612 ntBASIC15.3■□□□□ 0.04
CPT1AP50416 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPT1AP50416 RNLS-203ENST00000437752 525 ntTSL 2 BASIC15.3■□□□□ 0.04
CPT1AP50416 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.3■□□□□ 0.04
CPT1AP50416 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC15.3■□□□□ 0.04
CPT1AP50416 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.3■□□□□ 0.04
CPT1AP50416 AC023906.1-201ENST00000486386 453 ntBASIC15.3■□□□□ 0.04
CPT1AP50416 AC092612.1-201ENST00000514501 998 ntBASIC15.3■□□□□ 0.04
CPT1AP50416 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC15.3■□□□□ 0.04
CPT1AP50416 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.3■□□□□ 0.04
CPT1AP50416 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC15.3■□□□□ 0.04
CPT1AP50416 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.3■□□□□ 0.04
CPT1AP50416 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC15.3■□□□□ 0.04
CPT1AP50416 AC018846.1-201ENST00000568231 183 ntBASIC15.3■□□□□ 0.04
CPT1AP50416 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.3■□□□□ 0.04
CPT1AP50416 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC15.3■□□□□ 0.04
CPT1AP50416 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC15.3■□□□□ 0.04
CPT1AP50416 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CPT1AP50416 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CPT1AP50416 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPT1AP50416 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.3■□□□□ 0.04
CPT1AP50416 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPT1AP50416 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CPT1AP50416 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.29■□□□□ 0.04
CPT1AP50416 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPT1AP50416 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 KRT8P25-201ENST00000473150 1456 ntBASIC15.29■□□□□ 0.04
CPT1AP50416 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CPT1AP50416 ENPP7P8-202ENST00000527856 1345 ntBASIC15.29■□□□□ 0.04
CPT1AP50416 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPT1AP50416 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CPT1AP50416 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CPT1AP50416 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.29■□□□□ 0.04
CPT1AP50416 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 CD37-203ENST00000426897 1204 ntTSL 2 BASIC15.29■□□□□ 0.04
CPT1AP50416 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 AC010086.2-201ENST00000428616 226 ntBASIC15.29■□□□□ 0.04
CPT1AP50416 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPT1AP50416 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC15.29■□□□□ 0.04
CPT1AP50416 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC15.29■□□□□ 0.04
CPT1AP50416 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC15.29■□□□□ 0.04
CPT1AP50416 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC15.29■□□□□ 0.04
CPT1AP50416 AC132812.1-201ENST00000583145 892 ntBASIC15.29■□□□□ 0.04
CPT1AP50416 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.29■□□□□ 0.04
CPT1AP50416 AC048382.6-201ENST00000621980 1223 ntBASIC15.29■□□□□ 0.04
CPT1AP50416 CR392039.2-201ENST00000623182 509 ntBASIC15.29■□□□□ 0.04
CPT1AP50416 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
CPT1AP50416 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.29■□□□□ 0.04
CPT1AP50416 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CPT1AP50416 AC090643.2-201ENST00000623442 2029 ntBASIC15.29■□□□□ 0.04
CPT1AP50416 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPT1AP50416 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPT1AP50416 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.28■□□□□ 0.04
CPT1AP50416 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.28■□□□□ 0.04
CPT1AP50416 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.28■□□□□ 0.04
CPT1AP50416 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CPT1AP50416 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.28■□□□□ 0.04
CPT1AP50416 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms