Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ATP5G2P4-201ENST00000442175 420 ntBASIC13.28□□□□□ -0.28
CLK1P49759 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.28□□□□□ -0.28
CLK1P49759 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CLK1P49759 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.28□□□□□ -0.28
CLK1P49759 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.28□□□□□ -0.28
CLK1P49759 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.28□□□□□ -0.28
CLK1P49759 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.28□□□□□ -0.28
CLK1P49759 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.28□□□□□ -0.28
CLK1P49759 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.28□□□□□ -0.28
CLK1P49759 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.28□□□□□ -0.28
CLK1P49759 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.28□□□□□ -0.28
CLK1P49759 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.28□□□□□ -0.28
CLK1P49759 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CLK1P49759 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLK1P49759 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.28□□□□□ -0.28
CLK1P49759 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
CLK1P49759 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLK1P49759 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLK1P49759 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLK1P49759 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CLK1P49759 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CLK1P49759 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.27□□□□□ -0.28
CLK1P49759 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
CLK1P49759 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLK1P49759 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLK1P49759 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CLK1P49759 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLK1P49759 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.27□□□□□ -0.28
CLK1P49759 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLK1P49759 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CLK1P49759 AC011498.7-201ENST00000624986 2027 ntBASIC13.27□□□□□ -0.28
CLK1P49759 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLK1P49759 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.27□□□□□ -0.28
CLK1P49759 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
CLK1P49759 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CLK1P49759 AC135782.3-201ENST00000562782 2105 ntBASIC13.27□□□□□ -0.28
CLK1P49759 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.27□□□□□ -0.28
CLK1P49759 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.27□□□□□ -0.28
CLK1P49759 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 GK-202ENST00000378941 458 ntTSL 3 BASIC13.27□□□□□ -0.29
CLK1P49759 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 MIR658-201ENST00000385210 100 ntBASIC13.27□□□□□ -0.29
CLK1P49759 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.27□□□□□ -0.29
CLK1P49759 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.27□□□□□ -0.29
CLK1P49759 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.27□□□□□ -0.29
CLK1P49759 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 AP006547.1-201ENST00000563435 692 ntBASIC13.27□□□□□ -0.29
CLK1P49759 DUX4L46-201ENST00000566845 751 ntBASIC13.27□□□□□ -0.29
CLK1P49759 EEF1DP1-201ENST00000585891 896 ntBASIC13.27□□□□□ -0.29
CLK1P49759 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.27□□□□□ -0.29
CLK1P49759 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.27□□□□□ -0.29
CLK1P49759 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.27□□□□□ -0.29
CLK1P49759 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.27□□□□□ -0.29
CLK1P49759 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.27□□□□□ -0.29
CLK1P49759 LINC00567-201ENST00000569854 3409 ntBASIC13.27□□□□□ -0.29
CLK1P49759 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CLK1P49759 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLK1P49759 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC13.27□□□□□ -0.29
CLK1P49759 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CLK1P49759 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CLK1P49759 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.27□□□□□ -0.29
CLK1P49759 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms