Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 AC123567.1-201ENST00000548294 1261 ntBASIC11.52□□□□□ -0.57
NKX2-1P43699 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 AC106820.3-201ENST00000561653 397 ntBASIC11.52□□□□□ -0.57
NKX2-1P43699 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.52□□□□□ -0.57
NKX2-1P43699 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.52□□□□□ -0.57
NKX2-1P43699 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
NKX2-1P43699 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
NKX2-1P43699 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC11.52□□□□□ -0.57
NKX2-1P43699 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
NKX2-1P43699 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.52□□□□□ -0.57
NKX2-1P43699 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.52□□□□□ -0.57
NKX2-1P43699 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NKX2-1P43699 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 ZNF493-208ENST00000599461 1769 ntBASIC11.51□□□□□ -0.57
NKX2-1P43699 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC11.51□□□□□ -0.57
NKX2-1P43699 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
NKX2-1P43699 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
NKX2-1P43699 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 MIR770-201ENST00000390219 98 ntBASIC11.51□□□□□ -0.57
NKX2-1P43699 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.51□□□□□ -0.57
NKX2-1P43699 AL162726.2-201ENST00000438986 1017 ntBASIC11.51□□□□□ -0.57
NKX2-1P43699 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.51□□□□□ -0.57
NKX2-1P43699 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.51□□□□□ -0.57
NKX2-1P43699 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.51□□□□□ -0.57
NKX2-1P43699 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.51□□□□□ -0.57
NKX2-1P43699 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 TMEM261P1-201ENST00000604899 340 ntBASIC11.51□□□□□ -0.57
NKX2-1P43699 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.51□□□□□ -0.57
NKX2-1P43699 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 MARK2P16-201ENST00000605714 1723 ntBASIC11.51□□□□□ -0.57
NKX2-1P43699 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
NKX2-1P43699 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.51□□□□□ -0.57
NKX2-1P43699 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
NKX2-1P43699 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NKX2-1P43699 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms