Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.31□□□□□ -0.28
CCNA2P20248 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.31□□□□□ -0.28
CCNA2P20248 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.31□□□□□ -0.28
CCNA2P20248 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCNA2P20248 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.31□□□□□ -0.28
CCNA2P20248 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CCNA2P20248 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.31□□□□□ -0.28
CCNA2P20248 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.31□□□□□ -0.28
CCNA2P20248 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CCNA2P20248 AC022497.1-201ENST00000624916 3691 ntBASIC13.31□□□□□ -0.28
CCNA2P20248 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.31□□□□□ -0.28
CCNA2P20248 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.31□□□□□ -0.28
CCNA2P20248 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 AC060814.4-201ENST00000594169 2163 ntBASIC13.31□□□□□ -0.28
CCNA2P20248 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CCNA2P20248 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCNA2P20248 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 SHC1P1-201ENST00000425230 1745 ntBASIC13.3□□□□□ -0.28
CCNA2P20248 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.3□□□□□ -0.28
CCNA2P20248 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 MIR326-201ENST00000362220 95 ntBASIC13.3□□□□□ -0.28
CCNA2P20248 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.3□□□□□ -0.28
CCNA2P20248 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.3□□□□□ -0.28
CCNA2P20248 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 AC100850.1-201ENST00000506768 649 ntBASIC13.3□□□□□ -0.28
CCNA2P20248 MIR4259-201ENST00000584466 101 ntBASIC13.3□□□□□ -0.28
CCNA2P20248 AC239800.4-201ENST00000603712 296 ntBASIC13.3□□□□□ -0.28
CCNA2P20248 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 AC008687.7-202ENST00000637404 953 ntBASIC13.3□□□□□ -0.28
CCNA2P20248 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCNA2P20248 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.3□□□□□ -0.28
CCNA2P20248 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 AC012531.1-201ENST00000562848 2680 ntBASIC13.3□□□□□ -0.28
CCNA2P20248 LINC02486-201ENST00000604157 3000 ntBASIC13.3□□□□□ -0.28
CCNA2P20248 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.3□□□□□ -0.28
CCNA2P20248 KRT8P28-201ENST00000433288 1390 ntBASIC13.3□□□□□ -0.28
CCNA2P20248 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.3□□□□□ -0.28
CCNA2P20248 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCNA2P20248 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CCNA2P20248 AC134407.3-201ENST00000624035 2139 ntBASIC13.3□□□□□ -0.28
CCNA2P20248 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
CCNA2P20248 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.3□□□□□ -0.28
CCNA2P20248 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCNA2P20248 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCNA2P20248 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.29□□□□□ -0.28
CCNA2P20248 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.29□□□□□ -0.28
CCNA2P20248 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.29□□□□□ -0.28
CCNA2P20248 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms