Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NFKB1P19838 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.24□□□□□ -0.13
NFKB1P19838 AC244107.1-201ENST00000442033 332 ntBASIC14.24□□□□□ -0.13
NFKB1P19838 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.24□□□□□ -0.13
NFKB1P19838 RPSAP15-201ENST00000448168 861 ntBASIC14.24□□□□□ -0.13
NFKB1P19838 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.24□□□□□ -0.13
NFKB1P19838 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.24□□□□□ -0.13
NFKB1P19838 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.24□□□□□ -0.13
NFKB1P19838 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NFKB1P19838 PHBP15-201ENST00000574228 665 ntBASIC14.24□□□□□ -0.13
NFKB1P19838 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NFKB1P19838 MIR4525-201ENST00000580000 75 ntBASIC14.24□□□□□ -0.13
NFKB1P19838 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.24□□□□□ -0.13
NFKB1P19838 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.24□□□□□ -0.13
NFKB1P19838 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.24□□□□□ -0.13
NFKB1P19838 AL133467.4-201ENST00000602953 725 ntBASIC14.24□□□□□ -0.13
NFKB1P19838 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.24□□□□□ -0.13
NFKB1P19838 AC244093.1-201ENST00000610837 814 ntBASIC14.24□□□□□ -0.13
NFKB1P19838 LINC01783-202ENST00000614408 828 ntBASIC14.24□□□□□ -0.13
NFKB1P19838 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.24□□□□□ -0.13
NFKB1P19838 BX284668.2-205ENST00000619677 828 ntBASIC14.24□□□□□ -0.13
NFKB1P19838 GPR182-203ENST00000622922 591 ntBASIC14.24□□□□□ -0.13
NFKB1P19838 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.24□□□□□ -0.13
NFKB1P19838 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NFKB1P19838 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NFKB1P19838 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.24□□□□□ -0.13
NFKB1P19838 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NFKB1P19838 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NFKB1P19838 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.24□□□□□ -0.13
NFKB1P19838 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.24□□□□□ -0.13
NFKB1P19838 PEG13-201ENST00000631594 5667 ntBASIC14.24□□□□□ -0.13
NFKB1P19838 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.24□□□□□ -0.13
NFKB1P19838 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.24□□□□□ -0.13
NFKB1P19838 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NFKB1P19838 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NFKB1P19838 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
NFKB1P19838 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NFKB1P19838 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NFKB1P19838 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.23□□□□□ -0.13
NFKB1P19838 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NFKB1P19838 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
NFKB1P19838 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NFKB1P19838 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 MIR645-201ENST00000385283 94 ntBASIC14.23□□□□□ -0.13
NFKB1P19838 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.23□□□□□ -0.13
NFKB1P19838 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.23□□□□□ -0.13
NFKB1P19838 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.23□□□□□ -0.13
NFKB1P19838 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.23□□□□□ -0.13
NFKB1P19838 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.23□□□□□ -0.13
NFKB1P19838 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.23□□□□□ -0.13
NFKB1P19838 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.23□□□□□ -0.13
NFKB1P19838 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.23□□□□□ -0.13
NFKB1P19838 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
NFKB1P19838 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.23□□□□□ -0.13
NFKB1P19838 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.23□□□□□ -0.13
NFKB1P19838 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 AL445209.1-201ENST00000607269 3491 ntBASIC14.23□□□□□ -0.13
NFKB1P19838 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.23□□□□□ -0.13
NFKB1P19838 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.23□□□□□ -0.13
NFKB1P19838 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NFKB1P19838 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NFKB1P19838 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NFKB1P19838 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms