Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.39□□□□□ -0.11
ERCC2P18074 RN7SL665P-201ENST00000578793 300 ntBASIC14.39□□□□□ -0.11
ERCC2P18074 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.39□□□□□ -0.11
ERCC2P18074 AC006453.1-201ENST00000636037 1257 ntBASIC14.39□□□□□ -0.11
ERCC2P18074 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 AC138761.6-201ENST00000583997 1423 ntBASIC14.39□□□□□ -0.11
ERCC2P18074 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.39□□□□□ -0.11
ERCC2P18074 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.39□□□□□ -0.11
ERCC2P18074 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ERCC2P18074 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 AL031595.1-201ENST00000623969 4709 ntBASIC14.38□□□□□ -0.11
ERCC2P18074 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.38□□□□□ -0.11
ERCC2P18074 AC020763.3-201ENST00000625095 2904 ntBASIC14.38□□□□□ -0.11
ERCC2P18074 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ERCC2P18074 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
ERCC2P18074 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.38□□□□□ -0.11
ERCC2P18074 AC007274.2-201ENST00000421675 662 ntBASIC14.38□□□□□ -0.11
ERCC2P18074 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.38□□□□□ -0.11
ERCC2P18074 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.38□□□□□ -0.11
ERCC2P18074 FTH1P22-201ENST00000456305 520 ntBASIC14.38□□□□□ -0.11
ERCC2P18074 RN7SL788P-201ENST00000460504 316 ntBASIC14.38□□□□□ -0.11
ERCC2P18074 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.38□□□□□ -0.11
ERCC2P18074 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 FGFR3P5-201ENST00000564496 886 ntBASIC14.38□□□□□ -0.11
ERCC2P18074 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.38□□□□□ -0.11
ERCC2P18074 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.38□□□□□ -0.11
ERCC2P18074 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
ERCC2P18074 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
ERCC2P18074 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.38□□□□□ -0.11
ERCC2P18074 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ERCC2P18074 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.38□□□□□ -0.11
ERCC2P18074 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.38□□□□□ -0.11
ERCC2P18074 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC2P18074 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ERCC2P18074 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC2P18074 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC2P18074 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC2P18074 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC2P18074 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC2P18074 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC2P18074 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC2P18074 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ERCC2P18074 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.37□□□□□ -0.11
ERCC2P18074 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.37□□□□□ -0.11
ERCC2P18074 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ERCC2P18074 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC2P18074 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC2P18074 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC2P18074 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC2P18074 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
ERCC2P18074 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ERCC2P18074 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC2P18074 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.37□□□□□ -0.11
ERCC2P18074 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.37□□□□□ -0.11
ERCC2P18074 SLC25A24P2-201ENST00000415059 510 ntBASIC14.37□□□□□ -0.11
ERCC2P18074 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.37□□□□□ -0.11
ERCC2P18074 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.37□□□□□ -0.11
ERCC2P18074 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.37□□□□□ -0.11
ERCC2P18074 AC145285.5-201ENST00000562217 361 ntBASIC14.37□□□□□ -0.11
ERCC2P18074 AC132825.4-202ENST00000578792 434 ntBASIC14.37□□□□□ -0.11
ERCC2P18074 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.37□□□□□ -0.11
ERCC2P18074 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.37□□□□□ -0.11
ERCC2P18074 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms