Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AL359258.3-201ENST00000622910 2331 ntBASIC16.93■□□□□ 0.3
MYCNP04198 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MYCNP04198 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
MYCNP04198 AC139749.1-202ENST00000617529 3139 ntBASIC16.93■□□□□ 0.3
MYCNP04198 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC16.93■□□□□ 0.3
MYCNP04198 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.93■□□□□ 0.3
MYCNP04198 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
MYCNP04198 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MYCNP04198 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.93■□□□□ 0.3
MYCNP04198 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MYCNP04198 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
MYCNP04198 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MYCNP04198 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.93■□□□□ 0.3
MYCNP04198 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MYCNP04198 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MYCNP04198 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.93■□□□□ 0.3
MYCNP04198 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MYCNP04198 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
MYCNP04198 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MYCNP04198 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MYCNP04198 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.92■□□□□ 0.3
MYCNP04198 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.92■□□□□ 0.3
MYCNP04198 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MYCNP04198 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 UBE2V1P15-201ENST00000407776 448 ntBASIC16.92■□□□□ 0.3
MYCNP04198 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 TPTE2P1-202ENST00000429698 770 ntTSL 3 BASIC16.92■□□□□ 0.3
MYCNP04198 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC16.92■□□□□ 0.3
MYCNP04198 NMNAT1P2-201ENST00000435192 860 ntBASIC16.92■□□□□ 0.3
MYCNP04198 LINC01823-203ENST00000435895 766 ntTSL 3 BASIC16.92■□□□□ 0.3
MYCNP04198 RNLS-203ENST00000437752 525 ntTSL 2 BASIC16.92■□□□□ 0.3
MYCNP04198 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 AC093763.2-201ENST00000505334 1223 ntBASIC16.92■□□□□ 0.3
MYCNP04198 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC16.92■□□□□ 0.3
MYCNP04198 AC027369.2-201ENST00000528030 440 ntBASIC16.92■□□□□ 0.3
MYCNP04198 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
MYCNP04198 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.92■□□□□ 0.3
MYCNP04198 AC023825.1-201ENST00000566704 1030 ntBASIC16.92■□□□□ 0.3
MYCNP04198 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 AC022884.1-201ENST00000578490 577 ntTSL 4 BASIC16.92■□□□□ 0.3
MYCNP04198 RN7SL555P-201ENST00000584742 339 ntBASIC16.92■□□□□ 0.3
MYCNP04198 AC011492.1-201ENST00000600023 315 ntBASIC16.92■□□□□ 0.3
MYCNP04198 AC015802.5-201ENST00000607478 399 ntBASIC16.92■□□□□ 0.3
MYCNP04198 AC090164.2-201ENST00000611487 516 ntBASIC16.92■□□□□ 0.3
MYCNP04198 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 AL136295.7-201ENST00000619226 1200 ntBASIC16.92■□□□□ 0.3
MYCNP04198 AL138828.1-206ENST00000625353 811 ntTSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.92■□□□□ 0.3
MYCNP04198 PCDHA3-202ENST00000532566 4594 ntBASIC16.92■□□□□ 0.3
MYCNP04198 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
MYCNP04198 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MYCNP04198 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MYCNP04198 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
MYCNP04198 LINC00115-201ENST00000473798 1317 ntBASIC16.92■□□□□ 0.3
MYCNP04198 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MYCNP04198 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.92■□□□□ 0.3
MYCNP04198 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MYCNP04198 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 AL157414.3-201ENST00000624276 1954 ntBASIC16.91■□□□□ 0.3
MYCNP04198 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms