Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 AL132994.2-201ENST00000603120 687 ntBASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 BAP1-211ENST00000615113 489 ntBASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 AL008638.5-201ENST00000623814 1298 ntBASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 AC092299.1-201ENST00000632679 757 ntBASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 AC104306.2-201ENST00000451877 341 ntBASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 AC009779.1-201ENST00000551138 283 ntBASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 SNORD3B-2-202ENST00000571722 791 ntBASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 NAT9-222ENST00000583476 583 ntTSL 3 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 NKG7-204ENST00000595217 816 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 AC018735.1-201ENST00000437208 1502 ntBASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 AL157996.1-201ENST00000624684 2299 ntBASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC10.63□□□□□ -0.71
HLA-DRB4X5D2U9 TSN-212ENST00000536142 3328 ntTSL 2 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms