Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SNRPCP15-201ENST00000424055 192 ntBASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 B9D1-206ENST00000461069 923 ntTSL 2 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 RN7SL789P-201ENST00000478944 293 ntBASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 RNA5SP288-201ENST00000516075 93 ntBASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 BX088651.3-201ENST00000418155 352 ntBASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 HNRNPA1P33-201ENST00000421426 561 ntBASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 SLC25A15P1-201ENST00000456738 342 ntBASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC20.08■□□□□ 0.81
SHANK2Q9UPX8 TUBB8P5-201ENST00000445286 1351 ntBASIC20.08■□□□□ 0.8
SHANK2Q9UPX8 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHANK2Q9UPX8 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHANK2Q9UPX8 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
SHANK2Q9UPX8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHANK2Q9UPX8 AC023908.3-201ENST00000564211 3047 ntBASIC20.08■□□□□ 0.8
SHANK2Q9UPX8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 YY1P2-201ENST00000438766 948 ntBASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 RPSAP16-201ENST00000447583 821 ntBASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 SNRPD2P2-201ENST00000473818 333 ntBASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 MYL6-215ENST00000549566 685 ntTSL 2 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 AC133555.4-201ENST00000569081 152 ntBASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 RN7SL440P-201ENST00000577855 343 ntBASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 RPS5-205ENST00000598495 800 ntTSL 3 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 AL137028.2-201ENST00000614601 256 ntBASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 HNRNPLP1-201ENST00000421896 1501 ntBASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 AC008040.5-201ENST00000599781 1781 ntBASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHANK2Q9UPX8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 DUX4L31-201ENST00000446466 1136 ntBASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 YBX1P3-201ENST00000468366 909 ntBASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 ISL1-203ENST00000511384 981 ntTSL 5 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 MBP-230ENST00000528160 584 ntTSL 5 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms