Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 RPL17P45-201ENST00000586289 509 ntBASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 AC087392.5-201ENST00000612517 489 ntBASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 AC011491.1-203ENST00000637688 543 ntBASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 AC020910.6-201ENST00000623084 1459 ntBASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 HLA-DMA-203ENST00000395305 777 ntBASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 U62317.3-201ENST00000608319 855 ntBASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 AC006372.4-201ENST00000624122 1543 ntBASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLIP2Q9UDT6 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 Z69890.1-201ENST00000382990 339 ntBASIC16.62■□□□□ 0.25
CLIP2Q9UDT6 AC103592.1-201ENST00000394513 664 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms