Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CBX8Q9HC52 AC236430.1-201ENST00000402231 743 ntBASIC15.63■□□□□ 0.09
CBX8Q9HC52 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CBX8Q9HC52 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 HMGN1P19-201ENST00000436976 333 ntBASIC15.63■□□□□ 0.09
CBX8Q9HC52 CNN2P10-201ENST00000443067 918 ntBASIC15.63■□□□□ 0.09
CBX8Q9HC52 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CBX8Q9HC52 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.63■□□□□ 0.09
CBX8Q9HC52 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CBX8Q9HC52 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CBX8Q9HC52 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 AC008764.8-201ENST00000623966 2717 ntBASIC15.63■□□□□ 0.09
CBX8Q9HC52 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CBX8Q9HC52 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CBX8Q9HC52 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CBX8Q9HC52 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CBX8Q9HC52 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CBX8Q9HC52 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CBX8Q9HC52 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CBX8Q9HC52 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 AL160314.3-201ENST00000556041 767 ntBASIC15.62■□□□□ 0.09
CBX8Q9HC52 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 AC133540.1-201ENST00000620845 1019 ntBASIC15.62■□□□□ 0.09
CBX8Q9HC52 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 AC106818.1-201ENST00000623223 3242 ntBASIC15.62■□□□□ 0.09
CBX8Q9HC52 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.62■□□□□ 0.09
CBX8Q9HC52 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CBX8Q9HC52 AC012531.1-201ENST00000562848 2680 ntBASIC15.61■□□□□ 0.09
CBX8Q9HC52 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.61■□□□□ 0.09
CBX8Q9HC52 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CBX8Q9HC52 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CBX8Q9HC52 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CBX8Q9HC52 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CBX8Q9HC52 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CBX8Q9HC52 AC138969.2-201ENST00000532739 9932 ntBASIC15.61■□□□□ 0.09
CBX8Q9HC52 CTAGE10P-201ENST00000318353 2408 ntBASIC15.61■□□□□ 0.09
CBX8Q9HC52 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CBX8Q9HC52 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CBX8Q9HC52 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CBX8Q9HC52 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CBX8Q9HC52 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.61■□□□□ 0.09
CBX8Q9HC52 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms