Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
TRIM55Q9BYV6 AL031719.1-201ENST00000623365 2587 ntBASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 AP006547.1-201ENST00000563435 692 ntBASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 EEF1DP1-201ENST00000585891 896 ntBASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 BX088702.1-201ENST00000610784 235 ntBASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 SON-203ENST00000381679 7860 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM55Q9BYV6 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 ACTBP8-201ENST00000403258 1108 ntBASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 AC004466.1-201ENST00000599515 1080 ntBASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 AL096828.3-201ENST00000615354 462 ntBASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 AC010970.1-201ENST00000445125 1848 ntBASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM55Q9BYV6 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM55Q9BYV6 AL354989.2-201ENST00000435838 1540 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms