Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 MIR6799-201ENST00000620297 69 ntBASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 AC138761.6-201ENST00000583997 1423 ntBASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 AC007279.1-201ENST00000448547 837 ntBASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 AL805961.1-203ENST00000641078 1258 ntBASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 AC007326.2-201ENST00000624224 7579 ntBASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO3Q9BXY4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO3Q9BXY4 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms