Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 BICD1P1-201ENST00000457832 1222 ntBASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 AC114812.4-201ENST00000506676 757 ntBASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 MFSD12-215ENST00000615613 688 ntBASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 AC008040.5-201ENST00000599781 1781 ntBASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 ACY3-202ENST00000529256 933 ntTSL 3 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FYCO1Q9BQS8 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
FYCO1Q9BQS8 HNRNPLP1-201ENST00000421896 1501 ntBASIC21.02■□□□□ 0.95
FYCO1Q9BQS8 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
FYCO1Q9BQS8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC21.02■□□□□ 0.95
FYCO1Q9BQS8 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 AC000077.1-201ENST00000420012 953 ntBASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 TREX1-203ENST00000456089 629 ntTSL 3 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 AC099328.1-201ENST00000498809 1030 ntBASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 CETP-203ENST00000566128 1733 ntTSL 5 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 STK3-218ENST00000617590 2485 ntTSL 5 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 AC008038.1-201ENST00000634247 1314 ntBASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 PXK-210ENST00000479241 2817 ntTSL 2 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC21.01■□□□□ 0.95
FYCO1Q9BQS8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC21■□□□□ 0.95
FYCO1Q9BQS8 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC21■□□□□ 0.95
FYCO1Q9BQS8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FYCO1Q9BQS8 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC21■□□□□ 0.95
FYCO1Q9BQS8 AC026748.1-201ENST00000624349 3251 ntBASIC21■□□□□ 0.95
FYCO1Q9BQS8 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC21■□□□□ 0.95
FYCO1Q9BQS8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms