Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 GREM1-201ENST00000560677 623 ntTSL 4 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.42□□□□□ -0.58
RAB40CQ96S21 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 AC027369.3-201ENST00000530465 3707 ntBASIC11.41□□□□□ -0.58
RAB40CQ96S21 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 AL138709.1-201ENST00000614840 1693 ntBASIC11.41□□□□□ -0.58
RAB40CQ96S21 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 AC098850.1-201ENST00000419919 790 ntBASIC11.41□□□□□ -0.58
RAB40CQ96S21 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.41□□□□□ -0.58
RAB40CQ96S21 AC090386.2-201ENST00000623010 1039 ntBASIC11.41□□□□□ -0.58
RAB40CQ96S21 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB40CQ96S21 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RAB40CQ96S21 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RAB40CQ96S21 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC11.4□□□□□ -0.58
RAB40CQ96S21 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms