Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HPS1Q92902 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HPS1Q92902 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HPS1Q92902 AL021155.1-201ENST00000438808 2637 ntBASIC13.05□□□□□ -0.32
HPS1Q92902 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.05□□□□□ -0.32
HPS1Q92902 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HPS1Q92902 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.05□□□□□ -0.32
HPS1Q92902 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
HPS1Q92902 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC13.04□□□□□ -0.32
HPS1Q92902 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.04□□□□□ -0.32
HPS1Q92902 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 MKRN5P-201ENST00000445263 1467 ntBASIC13.04□□□□□ -0.32
HPS1Q92902 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.04□□□□□ -0.32
HPS1Q92902 AC024075.2-201ENST00000598112 1473 ntBASIC13.04□□□□□ -0.32
HPS1Q92902 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.04□□□□□ -0.32
HPS1Q92902 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.04□□□□□ -0.32
HPS1Q92902 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
HPS1Q92902 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.04□□□□□ -0.32
HPS1Q92902 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.04□□□□□ -0.32
HPS1Q92902 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.04□□□□□ -0.32
HPS1Q92902 NUS1P3-201ENST00000423502 862 ntBASIC13.04□□□□□ -0.32
HPS1Q92902 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HPS1Q92902 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.04□□□□□ -0.32
HPS1Q92902 CTBP2P5-201ENST00000454986 1264 ntBASIC13.04□□□□□ -0.32
HPS1Q92902 FO681548.1-201ENST00000455617 1132 ntBASIC13.04□□□□□ -0.32
HPS1Q92902 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC13.04□□□□□ -0.32
HPS1Q92902 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.04□□□□□ -0.32
HPS1Q92902 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.04□□□□□ -0.32
HPS1Q92902 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.04□□□□□ -0.32
HPS1Q92902 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.04□□□□□ -0.32
HPS1Q92902 SNX29P1-201ENST00000548357 1007 ntBASIC13.04□□□□□ -0.32
HPS1Q92902 AC079316.1-201ENST00000548397 411 ntBASIC13.04□□□□□ -0.32
HPS1Q92902 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.04□□□□□ -0.32
HPS1Q92902 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.04□□□□□ -0.32
HPS1Q92902 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.04□□□□□ -0.32
HPS1Q92902 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC13.04□□□□□ -0.32
HPS1Q92902 AC107373.2-201ENST00000607735 490 ntBASIC13.04□□□□□ -0.32
HPS1Q92902 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC13.04□□□□□ -0.32
HPS1Q92902 METTL15-211ENST00000634762 718 ntTSL 5 BASIC13.04□□□□□ -0.32
HPS1Q92902 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.04□□□□□ -0.32
HPS1Q92902 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.04□□□□□ -0.32
HPS1Q92902 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.04□□□□□ -0.32
HPS1Q92902 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC13.04□□□□□ -0.32
HPS1Q92902 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
HPS1Q92902 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.04□□□□□ -0.32
HPS1Q92902 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.04□□□□□ -0.32
HPS1Q92902 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC13.04□□□□□ -0.32
HPS1Q92902 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 DRD5P1-201ENST00000456605 1438 ntBASIC13.04□□□□□ -0.32
HPS1Q92902 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HPS1Q92902 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.03□□□□□ -0.32
HPS1Q92902 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 PDIA3P1-201ENST00000471856 1510 ntBASIC13.03□□□□□ -0.32
HPS1Q92902 NCLP1-201ENST00000445357 1963 ntBASIC13.03□□□□□ -0.32
HPS1Q92902 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.03□□□□□ -0.32
HPS1Q92902 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
HPS1Q92902 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
HPS1Q92902 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.03□□□□□ -0.32
HPS1Q92902 MTATP6P17-201ENST00000431030 672 ntBASIC13.03□□□□□ -0.32
HPS1Q92902 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
HPS1Q92902 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HPS1Q92902 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.03□□□□□ -0.32
HPS1Q92902 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms