Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNB3Q8WWL7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNB3Q8WWL7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCNB3Q8WWL7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNB3Q8WWL7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCNB3Q8WWL7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC21.16■□□□□ 0.98
CCNB3Q8WWL7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CCNB3Q8WWL7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNB3Q8WWL7 NCLP1-201ENST00000445357 1963 ntBASIC21.16■□□□□ 0.98
CCNB3Q8WWL7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 IFNWP2-201ENST00000431203 580 ntBASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 BEND3P1-201ENST00000421591 1944 ntBASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNB3Q8WWL7 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 STK3-218ENST00000617590 2485 ntTSL 5 BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 SNU13-204ENST00000402458 462 ntTSL 3 BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 MIR3940-201ENST00000579148 102 ntBASIC21.14■□□□□ 0.98
CCNB3Q8WWL7 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 AC245140.2-201ENST00000624054 1939 ntBASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 RCC2P5-201ENST00000492126 1487 ntBASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNB3Q8WWL7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 AL356740.1-201ENST00000602192 1297 ntBASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 AC073869.1-201ENST00000415574 2762 ntBASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 AF013593.1-201ENST00000458074 1487 ntBASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
CCNB3Q8WWL7 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNB3Q8WWL7 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCNB3Q8WWL7 RPSAP12-201ENST00000435879 888 ntBASIC21.12■□□□□ 0.97
CCNB3Q8WWL7 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC21.12■□□□□ 0.97
CCNB3Q8WWL7 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC21.12■□□□□ 0.97
CCNB3Q8WWL7 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms