Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 AC253536.2-201ENST00000423307 254 ntBASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 AC135506.1-201ENST00000603877 1799 ntBASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 DDX6P2-201ENST00000619520 1455 ntBASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 AC006987.4-201ENST00000430032 279 ntBASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 AC023157.1-201ENST00000453713 402 ntBASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 RPSAP5-201ENST00000485258 884 ntBASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 GH2-205ENST00000622506 702 ntTSL 5 BASIC17.76■□□□□ 0.43
COL22A1Q8NFW1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 AC015959.1-201ENST00000623263 1377 ntBASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 PFN1P10-201ENST00000455962 327 ntBASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 MTND6P9-201ENST00000458075 519 ntBASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 ALG1L14P-201ENST00000514230 434 ntBASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 SNORA74.2-201ENST00000516496 180 ntBASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 RN7SL678P-201ENST00000579533 299 ntBASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL22A1Q8NFW1 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 AP000897.1-201ENST00000584036 1613 ntBASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 RN7SL322P-201ENST00000583519 299 ntBASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 AC090643.2-201ENST00000623442 2029 ntBASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC17.74■□□□□ 0.43
COL22A1Q8NFW1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms