Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 AL391280.1-201ENST00000506969 1062 ntBASIC12.17□□□□□ -0.46
BEST4Q8NFU0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 AC068587.3-201ENST00000526613 355 ntBASIC12.17□□□□□ -0.46
BEST4Q8NFU0 CLUHP6-201ENST00000580789 941 ntBASIC12.17□□□□□ -0.46
BEST4Q8NFU0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 ENPP7P14-201ENST00000621765 1040 ntBASIC12.17□□□□□ -0.46
BEST4Q8NFU0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 AP000593.2-201ENST00000542775 1433 ntBASIC12.17□□□□□ -0.46
BEST4Q8NFU0 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 AOC4P-203ENST00000566825 2289 ntBASIC12.17□□□□□ -0.46
BEST4Q8NFU0 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.17□□□□□ -0.46
BEST4Q8NFU0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 AC073862.5-201ENST00000624129 2027 ntBASIC12.16□□□□□ -0.46
BEST4Q8NFU0 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 LINC01165-201ENST00000445190 1623 ntBASIC12.16□□□□□ -0.46
BEST4Q8NFU0 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 AC009093.2-202ENST00000620513 2079 ntBASIC12.16□□□□□ -0.46
BEST4Q8NFU0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 RN7SKP175-201ENST00000408472 289 ntBASIC12.16□□□□□ -0.46
BEST4Q8NFU0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 TMEM261P1-201ENST00000604899 340 ntBASIC12.16□□□□□ -0.46
BEST4Q8NFU0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
BEST4Q8NFU0 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.15□□□□□ -0.46
BEST4Q8NFU0 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms