Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRIM48Q8IWZ4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM48Q8IWZ4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM48Q8IWZ4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM48Q8IWZ4 Z82170.1-201ENST00000625081 3192 ntBASIC13.83□□□□□ -0.19
TRIM48Q8IWZ4 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM48Q8IWZ4 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM48Q8IWZ4 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM48Q8IWZ4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 HMGA1P1-201ENST00000415560 1062 ntBASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 AL627422.1-201ENST00000434104 580 ntBASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 AC079112.1-201ENST00000454972 939 ntBASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 CHCHD2P2-201ENST00000503744 321 ntBASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 AL031713.1-201ENST00000564813 661 ntBASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 AL021707.6-201ENST00000609212 491 ntBASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM48Q8IWZ4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 AL356585.2-201ENST00000625078 2396 ntBASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 AC103592.1-201ENST00000394513 664 ntBASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 RPL18AP8-201ENST00000486071 528 ntBASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 RN7SL81P-201ENST00000493781 261 ntBASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.82□□□□□ -0.2
TRIM48Q8IWZ4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms