Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC100858.1-201ENST00000514059 1228 ntBASIC15.58■□□□□ 0.08
TRIM50Q86XT4 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM50Q86XT4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 AL365181.1-201ENST00000564032 1828 ntBASIC15.57■□□□□ 0.08
TRIM50Q86XT4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 TREHP1-201ENST00000531328 465 ntBASIC15.57■□□□□ 0.08
TRIM50Q86XT4 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 AC013553.1-201ENST00000560906 267 ntBASIC15.57■□□□□ 0.08
TRIM50Q86XT4 C2orf69P1-201ENST00000563532 1093 ntBASIC15.57■□□□□ 0.08
TRIM50Q86XT4 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 BAP1-211ENST00000615113 489 ntBASIC15.57■□□□□ 0.08
TRIM50Q86XT4 MIR6756-201ENST00000616240 63 ntBASIC15.57■□□□□ 0.08
TRIM50Q86XT4 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM50Q86XT4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 AC152010.1-201ENST00000415779 2006 ntBASIC15.56■□□□□ 0.08
TRIM50Q86XT4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 SNX18-202ENST00000343017 3140 ntBASIC15.56■□□□□ 0.08
TRIM50Q86XT4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 AC093300.1-201ENST00000510368 1201 ntBASIC15.56■□□□□ 0.08
TRIM50Q86XT4 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 FUCA1P1-201ENST00000374476 1351 ntBASIC15.56■□□□□ 0.08
TRIM50Q86XT4 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 FAM45BP-202ENST00000592932 1624 ntBASIC15.56■□□□□ 0.08
TRIM50Q86XT4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM50Q86XT4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms