Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 FAM58BP-201ENST00000439056 645 ntBASIC9.41□□□□□ -0.9
SCXQ7RTU7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 MARK2P5-201ENST00000507649 634 ntBASIC9.41□□□□□ -0.9
SCXQ7RTU7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 DUX4L46-201ENST00000566845 751 ntBASIC9.41□□□□□ -0.9
SCXQ7RTU7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 RN7SL774P-201ENST00000577467 290 ntBASIC9.41□□□□□ -0.9
SCXQ7RTU7 MIR4783-201ENST00000580343 82 ntBASIC9.41□□□□□ -0.9
SCXQ7RTU7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 AC132192.2-201ENST00000596206 1147 ntBASIC9.41□□□□□ -0.9
SCXQ7RTU7 AC016629.1-201ENST00000596579 586 ntBASIC9.41□□□□□ -0.9
SCXQ7RTU7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 RETN-203ENST00000629642 400 ntTSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 AC068587.8-201ENST00000641239 219 ntBASIC9.41□□□□□ -0.9
SCXQ7RTU7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC9.41□□□□□ -0.9
SCXQ7RTU7 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SCXQ7RTU7 KRT8P19-201ENST00000551916 1455 ntBASIC9.4□□□□□ -0.9
SCXQ7RTU7 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 AL365181.3-201ENST00000605886 3222 ntBASIC9.4□□□□□ -0.9
SCXQ7RTU7 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 AL138725.1-201ENST00000407347 1314 ntBASIC9.4□□□□□ -0.9
SCXQ7RTU7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 RPL18P13-201ENST00000478088 569 ntBASIC9.4□□□□□ -0.9
SCXQ7RTU7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 NUP210P1-202ENST00000504322 710 ntBASIC9.4□□□□□ -0.9
SCXQ7RTU7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 AC024681.1-201ENST00000521917 487 ntBASIC9.4□□□□□ -0.9
SCXQ7RTU7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 AC008805.1-201ENST00000590892 364 ntBASIC9.4□□□□□ -0.9
SCXQ7RTU7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 PCBP2-OT1-201ENST00000634357 590 ntBASIC9.4□□□□□ -0.9
SCXQ7RTU7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.9
SCXQ7RTU7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SCXQ7RTU7 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms