Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 LINC00265-2P-201ENST00000413372 782 ntBASIC12.24□□□□□ -0.45
HIST1H3AP68431 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 ISCA2P1-201ENST00000425548 448 ntBASIC12.24□□□□□ -0.45
HIST1H3AP68431 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 KRT8P13-201ENST00000463294 1010 ntBASIC12.24□□□□□ -0.45
HIST1H3AP68431 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 AC090857.1-201ENST00000527400 390 ntBASIC12.24□□□□□ -0.45
HIST1H3AP68431 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 PHBP15-201ENST00000574228 665 ntBASIC12.24□□□□□ -0.45
HIST1H3AP68431 RN7SL774P-201ENST00000577467 290 ntBASIC12.24□□□□□ -0.45
HIST1H3AP68431 AL133467.4-201ENST00000602953 725 ntBASIC12.24□□□□□ -0.45
HIST1H3AP68431 AL365181.3-201ENST00000605886 3222 ntBASIC12.24□□□□□ -0.45
HIST1H3AP68431 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 AC131212.3-201ENST00000624087 4219 ntBASIC12.23□□□□□ -0.45
HIST1H3AP68431 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 MKRN5P-201ENST00000445263 1467 ntBASIC12.23□□□□□ -0.45
HIST1H3AP68431 AF013593.1-201ENST00000458074 1487 ntBASIC12.23□□□□□ -0.45
HIST1H3AP68431 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 KRT8P31-201ENST00000504812 1408 ntBASIC12.23□□□□□ -0.45
HIST1H3AP68431 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 SCARNA20.5-201ENST00000516991 142 ntBASIC12.23□□□□□ -0.45
HIST1H3AP68431 POU5F1P2-201ENST00000521750 823 ntBASIC12.23□□□□□ -0.45
HIST1H3AP68431 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 MIR4538-201ENST00000581377 78 ntBASIC12.23□□□□□ -0.45
HIST1H3AP68431 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 MIR6769A-201ENST00000617340 73 ntBASIC12.23□□□□□ -0.45
HIST1H3AP68431 AC244452.3-201ENST00000636814 210 ntBASIC12.23□□□□□ -0.45
HIST1H3AP68431 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms