Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.12□□□□□ -0.47
ACTBP60709 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
ACTBP60709 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.12□□□□□ -0.47
ACTBP60709 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.12□□□□□ -0.47
ACTBP60709 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.12□□□□□ -0.47
ACTBP60709 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ACTBP60709 MIR5189-201ENST00000577370 114 ntBASIC12.12□□□□□ -0.47
ACTBP60709 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ACTBP60709 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ACTBP60709 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.12□□□□□ -0.47
ACTBP60709 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ACTBP60709 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ACTBP60709 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.12□□□□□ -0.47
ACTBP60709 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ACTBP60709 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ACTBP60709 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ACTBP60709 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ACTBP60709 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ACTBP60709 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ACTBP60709 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.12□□□□□ -0.47
ACTBP60709 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ACTBP60709 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
ACTBP60709 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.11□□□□□ -0.47
ACTBP60709 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
ACTBP60709 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.11□□□□□ -0.47
ACTBP60709 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.11□□□□□ -0.47
ACTBP60709 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ACTBP60709 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.11□□□□□ -0.47
ACTBP60709 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.11□□□□□ -0.47
ACTBP60709 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.11□□□□□ -0.47
ACTBP60709 SNORA50C-201ENST00000408535 133 ntBASIC12.11□□□□□ -0.47
ACTBP60709 HMGA1P1-201ENST00000415560 1062 ntBASIC12.11□□□□□ -0.47
ACTBP60709 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.11□□□□□ -0.47
ACTBP60709 POM121L8P-201ENST00000417732 1281 ntBASIC12.11□□□□□ -0.47
ACTBP60709 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.11□□□□□ -0.47
ACTBP60709 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 POM121L9P-203ENST00000441984 1285 ntBASIC12.11□□□□□ -0.47
ACTBP60709 AC012441.1-201ENST00000446669 685 ntBASIC12.11□□□□□ -0.47
ACTBP60709 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.11□□□□□ -0.47
ACTBP60709 AC007389.4-201ENST00000454674 793 ntBASIC12.11□□□□□ -0.47
ACTBP60709 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.11□□□□□ -0.47
ACTBP60709 RN7SL837P-201ENST00000463010 287 ntBASIC12.11□□□□□ -0.47
ACTBP60709 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.11□□□□□ -0.47
ACTBP60709 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.11□□□□□ -0.47
ACTBP60709 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.11□□□□□ -0.47
ACTBP60709 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.11□□□□□ -0.47
ACTBP60709 SNORA50.1-201ENST00000628590 135 ntBASIC12.11□□□□□ -0.47
ACTBP60709 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.11□□□□□ -0.47
ACTBP60709 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
ACTBP60709 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ACTBP60709 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ACTBP60709 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 MSTO2P-201ENST00000314835 1709 ntBASIC12.11□□□□□ -0.47
ACTBP60709 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ACTBP60709 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.11□□□□□ -0.47
ACTBP60709 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ACTBP60709 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ACTBP60709 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ACTBP60709 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ACTBP60709 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ACTBP60709 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ACTBP60709 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ACTBP60709 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ACTBP60709 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.1□□□□□ -0.47
ACTBP60709 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ACTBP60709 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.1□□□□□ -0.47
ACTBP60709 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ACTBP60709 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ACTBP60709 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.1□□□□□ -0.47
ACTBP60709 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ACTBP60709 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
ACTBP60709 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ACTBP60709 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ACTBP60709 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ACTBP60709 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ACTBP60709 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.1□□□□□ -0.47
ACTBP60709 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms