Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SUMO3P55854 ODCP-201ENST00000459650 1639 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 AC106827.1-201ENST00000366454 431 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SUMO3P55854 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SUMO3P55854 DKKL1P1-201ENST00000400550 698 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 GGTLC4P-201ENST00000402176 664 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.64□□□□□ -0.39
SUMO3P55854 IMP3P2-201ENST00000489760 475 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 ORAOV1P1-201ENST00000503108 395 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 AC134698.3-201ENST00000523880 214 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.64□□□□□ -0.39
SUMO3P55854 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.64□□□□□ -0.39
SUMO3P55854 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.64□□□□□ -0.39
SUMO3P55854 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.64□□□□□ -0.39
SUMO3P55854 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.64□□□□□ -0.39
SUMO3P55854 MIR2392-201ENST00000584881 84 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 AC005632.3-201ENST00000605544 308 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 AC012073.1-201ENST00000606114 1108 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 AL031673.1-201ENST00000611460 466 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SUMO3P55854 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.64□□□□□ -0.39
SUMO3P55854 AC108024.1-201ENST00000626286 1721 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.64□□□□□ -0.39
SUMO3P55854 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 AC020763.3-201ENST00000625095 2904 ntBASIC12.64□□□□□ -0.39
SUMO3P55854 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.64□□□□□ -0.39
SUMO3P55854 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SUMO3P55854 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.63□□□□□ -0.39
SUMO3P55854 AC019109.1-201ENST00000401725 1874 ntBASIC12.63□□□□□ -0.39
SUMO3P55854 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SUMO3P55854 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
SUMO3P55854 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SUMO3P55854 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SUMO3P55854 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SUMO3P55854 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.63□□□□□ -0.39
SUMO3P55854 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.63□□□□□ -0.39
SUMO3P55854 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.63□□□□□ -0.39
SUMO3P55854 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.63□□□□□ -0.39
SUMO3P55854 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.63□□□□□ -0.39
SUMO3P55854 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.63□□□□□ -0.39
SUMO3P55854 AC019193.1-201ENST00000506678 823 ntBASIC12.63□□□□□ -0.39
SUMO3P55854 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.63□□□□□ -0.39
SUMO3P55854 AC095040.1-201ENST00000513286 675 ntBASIC12.63□□□□□ -0.39
SUMO3P55854 OR5BD1P-201ENST00000532527 817 ntBASIC12.63□□□□□ -0.39
SUMO3P55854 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.63□□□□□ -0.39
SUMO3P55854 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.63□□□□□ -0.39
SUMO3P55854 SNORD3B-1-201ENST00000577988 758 ntBASIC12.63□□□□□ -0.39
SUMO3P55854 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.63□□□□□ -0.39
SUMO3P55854 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.63□□□□□ -0.39
SUMO3P55854 MIR4522-201ENST00000584932 87 ntBASIC12.63□□□□□ -0.39
SUMO3P55854 AC103810.10-201ENST00000606504 343 ntBASIC12.63□□□□□ -0.39
SUMO3P55854 AC084346.2-201ENST00000607097 949 ntBASIC12.63□□□□□ -0.39
SUMO3P55854 AL359091.4-201ENST00000610052 409 ntBASIC12.63□□□□□ -0.39
SUMO3P55854 AL021578.1-201ENST00000613646 709 ntBASIC12.63□□□□□ -0.39
SUMO3P55854 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SUMO3P55854 AC007718.1-201ENST00000621078 280 ntBASIC12.63□□□□□ -0.39
SUMO3P55854 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.63□□□□□ -0.39
SUMO3P55854 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.63□□□□□ -0.39
SUMO3P55854 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms