Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.03■□□□□ -0
SSR1P43307 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SSR1P43307 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.03■□□□□ -0
SSR1P43307 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SSR1P43307 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.03■□□□□ -0
SSR1P43307 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
SSR1P43307 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SSR1P43307 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC15.03■□□□□ -0
SSR1P43307 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.03■□□□□ -0
SSR1P43307 FAM21FP-201ENST00000426241 1131 ntBASIC15.03■□□□□ -0
SSR1P43307 KRT223P-202ENST00000449164 1292 ntBASIC15.03■□□□□ -0
SSR1P43307 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.03■□□□□ -0
SSR1P43307 AC006122.1-201ENST00000493323 440 ntBASIC15.03■□□□□ -0
SSR1P43307 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.03■□□□□ -0
SSR1P43307 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.03■□□□□ -0
SSR1P43307 AC140658.4-201ENST00000561990 352 ntBASIC15.03■□□□□ -0
SSR1P43307 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.03■□□□□ -0
SSR1P43307 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.03■□□□□ -0
SSR1P43307 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.03■□□□□ -0
SSR1P43307 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.03■□□□□ -0
SSR1P43307 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.03■□□□□ -0
SSR1P43307 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.03■□□□□ -0
SSR1P43307 AC133540.1-201ENST00000620845 1019 ntBASIC15.03■□□□□ -0
SSR1P43307 AL591471.1-201ENST00000621855 229 ntBASIC15.03■□□□□ -0
SSR1P43307 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SSR1P43307 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.03■□□□□ -0
SSR1P43307 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SSR1P43307 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.03■□□□□ -0
SSR1P43307 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SSR1P43307 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSR1P43307 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.02■□□□□ -0
SSR1P43307 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.02■□□□□ -0
SSR1P43307 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.02■□□□□ -0
SSR1P43307 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC15.02■□□□□ -0
SSR1P43307 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SSR1P43307 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.02■□□□□ -0
SSR1P43307 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.02■□□□□ -0
SSR1P43307 AC010336.1-201ENST00000539278 4739 ntBASIC15.02■□□□□ -0
SSR1P43307 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.02■□□□□ -0
SSR1P43307 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC15.02■□□□□ -0
SSR1P43307 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.02■□□□□ -0
SSR1P43307 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 MIR658-201ENST00000385210 100 ntBASIC15.02■□□□□ -0
SSR1P43307 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
SSR1P43307 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.02■□□□□ -0
SSR1P43307 MTX1P1-201ENST00000440904 838 ntBASIC15.02■□□□□ -0
SSR1P43307 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.02■□□□□ -0
SSR1P43307 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.02■□□□□ -0
SSR1P43307 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.02■□□□□ -0
SSR1P43307 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.02■□□□□ -0
SSR1P43307 AL160314.3-201ENST00000556041 767 ntBASIC15.02■□□□□ -0
SSR1P43307 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.02■□□□□ -0
SSR1P43307 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSR1P43307 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
SSR1P43307 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSR1P43307 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSR1P43307 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SSR1P43307 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSR1P43307 CYP4F23P-201ENST00000593402 1579 ntBASIC15.02□□□□□ -0.01
SSR1P43307 AC011481.3-201ENST00000623895 5594 ntBASIC15.02□□□□□ -0.01
SSR1P43307 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSR1P43307 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.02□□□□□ -0.01
SSR1P43307 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC15.02□□□□□ -0.01
SSR1P43307 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.02□□□□□ -0.01
SSR1P43307 AC015818.8-201ENST00000587907 1519 ntBASIC15.02□□□□□ -0.01
SSR1P43307 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms