Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
GRIA1P42261 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.2□□□□□ -0.14
GRIA1P42261 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.2□□□□□ -0.14
GRIA1P42261 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
GRIA1P42261 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GRIA1P42261 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.2□□□□□ -0.14
GRIA1P42261 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GRIA1P42261 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GRIA1P42261 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.2□□□□□ -0.14
GRIA1P42261 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GRIA1P42261 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GRIA1P42261 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GRIA1P42261 AC102953.2-201ENST00000609755 3026 ntBASIC14.2□□□□□ -0.14
GRIA1P42261 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.2□□□□□ -0.14
GRIA1P42261 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GRIA1P42261 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GRIA1P42261 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.19□□□□□ -0.14
GRIA1P42261 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.19□□□□□ -0.14
GRIA1P42261 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 KRT8P43-201ENST00000406052 1458 ntBASIC14.19□□□□□ -0.14
GRIA1P42261 MKRN5P-201ENST00000445263 1467 ntBASIC14.19□□□□□ -0.14
GRIA1P42261 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.19□□□□□ -0.14
GRIA1P42261 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.19□□□□□ -0.14
GRIA1P42261 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.19□□□□□ -0.14
GRIA1P42261 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
GRIA1P42261 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
GRIA1P42261 BRWD1P1-201ENST00000401091 371 ntBASIC14.19□□□□□ -0.14
GRIA1P42261 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.19□□□□□ -0.14
GRIA1P42261 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.19□□□□□ -0.14
GRIA1P42261 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.19□□□□□ -0.14
GRIA1P42261 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.19□□□□□ -0.14
GRIA1P42261 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.19□□□□□ -0.14
GRIA1P42261 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.19□□□□□ -0.14
GRIA1P42261 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.19□□□□□ -0.14
GRIA1P42261 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.19□□□□□ -0.14
GRIA1P42261 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.19□□□□□ -0.14
GRIA1P42261 AL645939.5-201ENST00000606834 243 ntBASIC14.19□□□□□ -0.14
GRIA1P42261 AL021707.6-201ENST00000609212 491 ntBASIC14.19□□□□□ -0.14
GRIA1P42261 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 AC020763.3-201ENST00000625095 2904 ntBASIC14.19□□□□□ -0.14
GRIA1P42261 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GRIA1P42261 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GRIA1P42261 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.19□□□□□ -0.14
GRIA1P42261 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.18□□□□□ -0.14
GRIA1P42261 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.18□□□□□ -0.14
GRIA1P42261 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GRIA1P42261 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.18□□□□□ -0.14
GRIA1P42261 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GRIA1P42261 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GRIA1P42261 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GRIA1P42261 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GRIA1P42261 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GRIA1P42261 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.18□□□□□ -0.14
GRIA1P42261 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
GRIA1P42261 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
GRIA1P42261 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GRIA1P42261 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GRIA1P42261 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.18□□□□□ -0.14
GRIA1P42261 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.18□□□□□ -0.14
GRIA1P42261 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GRIA1P42261 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GRIA1P42261 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.18□□□□□ -0.14
GRIA1P42261 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GRIA1P42261 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
GRIA1P42261 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms