Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.92□□□□□ -0.18
VARSP26640 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.92□□□□□ -0.18
VARSP26640 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.92□□□□□ -0.18
VARSP26640 VDAC1P1-201ENST00000439229 848 ntBASIC13.92□□□□□ -0.18
VARSP26640 Z97180.1-201ENST00000445173 988 ntBASIC13.92□□□□□ -0.18
VARSP26640 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 TUBB8P8-201ENST00000458717 1058 ntBASIC13.92□□□□□ -0.18
VARSP26640 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.92□□□□□ -0.18
VARSP26640 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.92□□□□□ -0.18
VARSP26640 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.92□□□□□ -0.18
VARSP26640 AC105129.2-201ENST00000559536 390 ntBASIC13.92□□□□□ -0.18
VARSP26640 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.92□□□□□ -0.18
VARSP26640 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.92□□□□□ -0.18
VARSP26640 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.92□□□□□ -0.18
VARSP26640 AC124068.2-201ENST00000569473 1109 ntBASIC13.92□□□□□ -0.18
VARSP26640 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.92□□□□□ -0.18
VARSP26640 AC133540.1-201ENST00000620845 1019 ntBASIC13.92□□□□□ -0.18
VARSP26640 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.92□□□□□ -0.18
VARSP26640 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.92□□□□□ -0.18
VARSP26640 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.92□□□□□ -0.18
VARSP26640 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VARSP26640 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VARSP26640 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VARSP26640 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.92□□□□□ -0.18
VARSP26640 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VARSP26640 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
VARSP26640 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
VARSP26640 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.91□□□□□ -0.18
VARSP26640 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
VARSP26640 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 AC018735.1-201ENST00000437208 1502 ntBASIC13.91□□□□□ -0.18
VARSP26640 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.91□□□□□ -0.18
VARSP26640 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VARSP26640 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.91□□□□□ -0.18
VARSP26640 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VARSP26640 FXNP2-201ENST00000411625 547 ntBASIC13.91□□□□□ -0.18
VARSP26640 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.91□□□□□ -0.18
VARSP26640 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.91□□□□□ -0.18
VARSP26640 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC13.91□□□□□ -0.18
VARSP26640 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC13.91□□□□□ -0.18
VARSP26640 RN7SL720P-201ENST00000488178 304 ntBASIC13.91□□□□□ -0.18
VARSP26640 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC13.91□□□□□ -0.18
VARSP26640 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.91□□□□□ -0.18
VARSP26640 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.91□□□□□ -0.18
VARSP26640 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.91□□□□□ -0.18
VARSP26640 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 AC003686.1-201ENST00000550956 1034 ntBASIC13.91□□□□□ -0.18
VARSP26640 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.91□□□□□ -0.18
VARSP26640 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.91□□□□□ -0.18
VARSP26640 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.91□□□□□ -0.18
VARSP26640 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.91□□□□□ -0.18
VARSP26640 AC021016.3-201ENST00000608367 477 ntBASIC13.91□□□□□ -0.18
VARSP26640 AC022960.2-201ENST00000616300 666 ntBASIC13.91□□□□□ -0.18
VARSP26640 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.91□□□□□ -0.18
VARSP26640 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.91□□□□□ -0.18
VARSP26640 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 LAP3P2-201ENST00000454686 1454 ntBASIC13.91□□□□□ -0.18
VARSP26640 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
VARSP26640 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms