Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
RETP07949 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RETP07949 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RETP07949 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RETP07949 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
RETP07949 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RETP07949 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.12□□□□□ -0.15
RETP07949 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RETP07949 KRT18P4-201ENST00000422599 1288 ntBASIC14.12□□□□□ -0.15
RETP07949 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.12□□□□□ -0.15
RETP07949 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC14.12□□□□□ -0.15
RETP07949 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RETP07949 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.12□□□□□ -0.15
RETP07949 CHCHD2P2-201ENST00000503744 321 ntBASIC14.12□□□□□ -0.15
RETP07949 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.12□□□□□ -0.15
RETP07949 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.12□□□□□ -0.15
RETP07949 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.12□□□□□ -0.15
RETP07949 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.12□□□□□ -0.15
RETP07949 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.12□□□□□ -0.15
RETP07949 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
RETP07949 VENTXP3-201ENST00000546480 773 ntBASIC14.12□□□□□ -0.15
RETP07949 AC145285.5-201ENST00000562217 361 ntBASIC14.12□□□□□ -0.15
RETP07949 NDUFB10P1-201ENST00000567319 521 ntBASIC14.12□□□□□ -0.15
RETP07949 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.12□□□□□ -0.15
RETP07949 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.12□□□□□ -0.15
RETP07949 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
RETP07949 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.12□□□□□ -0.15
RETP07949 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.12□□□□□ -0.15
RETP07949 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
RETP07949 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.12□□□□□ -0.15
RETP07949 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RETP07949 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
RETP07949 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RETP07949 WASH7P-201ENST00000488147 1351 ntBASIC14.11□□□□□ -0.15
RETP07949 TCAM1P-207ENST00000485295 1537 ntBASIC14.11□□□□□ -0.15
RETP07949 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RETP07949 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RETP07949 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 GRPEL2P1-201ENST00000453145 339 ntBASIC14.11□□□□□ -0.15
RETP07949 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.11□□□□□ -0.15
RETP07949 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 RN7SL375P-201ENST00000492442 298 ntBASIC14.11□□□□□ -0.15
RETP07949 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.11□□□□□ -0.15
RETP07949 AC092612.1-201ENST00000514501 998 ntBASIC14.11□□□□□ -0.15
RETP07949 AL590235.1-201ENST00000564650 861 ntBASIC14.11□□□□□ -0.15
RETP07949 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.11□□□□□ -0.15
RETP07949 AP005264.5-201ENST00000590066 467 ntBASIC14.11□□□□□ -0.15
RETP07949 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.11□□□□□ -0.15
RETP07949 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC14.11□□□□□ -0.15
RETP07949 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RETP07949 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.11□□□□□ -0.15
RETP07949 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.11□□□□□ -0.15
RETP07949 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms