Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 MARK2P16-201ENST00000605714 1723 ntBASIC11.1□□□□□ -0.63
IFNA1P01562 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
IFNA1P01562 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.1□□□□□ -0.63
IFNA1P01562 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.1□□□□□ -0.63
IFNA1P01562 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.1□□□□□ -0.63
IFNA1P01562 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 HMGA1P1-201ENST00000415560 1062 ntBASIC11.1□□□□□ -0.63
IFNA1P01562 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.1□□□□□ -0.63
IFNA1P01562 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.1□□□□□ -0.63
IFNA1P01562 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.1□□□□□ -0.63
IFNA1P01562 EIF3FP3-201ENST00000434851 1086 ntBASIC11.1□□□□□ -0.63
IFNA1P01562 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 GNAQP1-201ENST00000444815 1067 ntBASIC11.1□□□□□ -0.63
IFNA1P01562 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 MEIS3P1-201ENST00000495167 958 ntBASIC11.1□□□□□ -0.63
IFNA1P01562 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.1□□□□□ -0.63
IFNA1P01562 RNA5SP419-201ENST00000515908 135 ntBASIC11.1□□□□□ -0.63
IFNA1P01562 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.1□□□□□ -0.63
IFNA1P01562 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
IFNA1P01562 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC11.1□□□□□ -0.63
IFNA1P01562 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
IFNA1P01562 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.1□□□□□ -0.63
IFNA1P01562 RN7SL510P-201ENST00000581311 263 ntBASIC11.1□□□□□ -0.63
IFNA1P01562 AC138696.2-201ENST00000607376 223 ntBASIC11.1□□□□□ -0.63
IFNA1P01562 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.1□□□□□ -0.63
IFNA1P01562 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC11.1□□□□□ -0.63
IFNA1P01562 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 USB1-207ENST00000563149 1751 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.1□□□□□ -0.63
IFNA1P01562 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
IFNA1P01562 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC11.1□□□□□ -0.63
IFNA1P01562 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.1□□□□□ -0.63
IFNA1P01562 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
IFNA1P01562 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IFNA1P01562 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
IFNA1P01562 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
IFNA1P01562 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
IFNA1P01562 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC11.09□□□□□ -0.63
IFNA1P01562 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 MRPL3P1-201ENST00000400109 1033 ntBASIC11.09□□□□□ -0.63
IFNA1P01562 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.09□□□□□ -0.63
IFNA1P01562 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
IFNA1P01562 KRT18P15-201ENST00000458108 1291 ntBASIC11.09□□□□□ -0.63
IFNA1P01562 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms