Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM88BA6NKF7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM88BA6NKF7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TMEM88BA6NKF7 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.83■□□□□ 0.13
TMEM88BA6NKF7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM88BA6NKF7 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC15.83■□□□□ 0.13
TMEM88BA6NKF7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.83■□□□□ 0.13
TMEM88BA6NKF7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM88BA6NKF7 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
TMEM88BA6NKF7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM88BA6NKF7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM88BA6NKF7 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 AC005011.1-201ENST00000455206 210 ntBASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 DNM1P50-201ENST00000565767 508 ntBASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 RBP1-206ENST00000617459 667 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 CD9-212ENST00000610354 1315 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM88BA6NKF7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 EEF1GP3-201ENST00000421044 1288 ntBASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 AC116347.1-201ENST00000442824 720 ntBASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 RN7SL76P-201ENST00000482435 289 ntBASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 AC010442.2-201ENST00000509301 407 ntBASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 ST3GAL1P1-201ENST00000513810 1014 ntBASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 RN7SL460P-201ENST00000582806 258 ntBASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 AC091736.1-201ENST00000609370 305 ntBASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms