Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 AC002350.2-201ENST00000623894 1828 ntBASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 ZNF493-208ENST00000599461 1769 ntBASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 AL354877.1-201ENST00000424412 413 ntBASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 KRT17P7-201ENST00000451704 1104 ntBASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 CROCCP4-201ENST00000457096 498 ntBASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAF6Q9Y4K3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF6Q9Y4K3 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 AC018629.1-201ENST00000623381 1736 ntBASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 Z98257.2-202ENST00000641138 1548 ntBASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 XBP1P1-201ENST00000436573 652 ntBASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 AC239800.4-201ENST00000603712 296 ntBASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 AC060814.4-201ENST00000594169 2163 ntBASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF6Q9Y4K3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms