Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 AC092580.1-201ENST00000433998 658 ntBASIC13□□□□□ -0.33
NPIPA1Q9UND3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 AP003398.1-201ENST00000531124 318 ntBASIC13□□□□□ -0.33
NPIPA1Q9UND3 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 DNM1P30-201ENST00000563586 452 ntBASIC13□□□□□ -0.33
NPIPA1Q9UND3 MIR3180-2-201ENST00000581748 88 ntBASIC13□□□□□ -0.33
NPIPA1Q9UND3 RPL17P45-201ENST00000586289 509 ntBASIC13□□□□□ -0.33
NPIPA1Q9UND3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA1Q9UND3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA1Q9UND3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 MRPL22P1-201ENST00000505398 616 ntBASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 AC107464.3-201ENST00000609172 737 ntBASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA1Q9UND3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms