Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL355102.3-201ENST00000554299 1678 ntBASIC15.97■□□□□ 0.15
ERCC4Q92889 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ERCC4Q92889 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC4Q92889 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.97■□□□□ 0.15
ERCC4Q92889 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.97■□□□□ 0.15
ERCC4Q92889 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ERCC4Q92889 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.97■□□□□ 0.15
ERCC4Q92889 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC15.97■□□□□ 0.15
ERCC4Q92889 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ERCC4Q92889 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ERCC4Q92889 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC4Q92889 AC061965.1-201ENST00000560524 1465 ntBASIC15.97■□□□□ 0.15
ERCC4Q92889 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC4Q92889 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ERCC4Q92889 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 OS9-203ENST00000389142 2457 ntTSL 5 BASIC15.96■□□□□ 0.15
ERCC4Q92889 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ERCC4Q92889 AP002353.1-201ENST00000528257 1599 ntBASIC15.96■□□□□ 0.15
ERCC4Q92889 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC15.96■□□□□ 0.15
ERCC4Q92889 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC4Q92889 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
ERCC4Q92889 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC4Q92889 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.96■□□□□ 0.15
ERCC4Q92889 AL391647.1-201ENST00000395664 511 ntBASIC15.96■□□□□ 0.15
ERCC4Q92889 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 HMGA1P1-201ENST00000415560 1062 ntBASIC15.96■□□□□ 0.15
ERCC4Q92889 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
ERCC4Q92889 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.96■□□□□ 0.15
ERCC4Q92889 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 KRT18P8-201ENST00000581937 1246 ntBASIC15.96■□□□□ 0.15
ERCC4Q92889 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.96■□□□□ 0.15
ERCC4Q92889 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ERCC4Q92889 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.96■□□□□ 0.15
ERCC4Q92889 AC092299.1-201ENST00000632679 757 ntBASIC15.96■□□□□ 0.15
ERCC4Q92889 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ERCC4Q92889 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC4Q92889 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC4Q92889 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC15.96■□□□□ 0.15
ERCC4Q92889 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.96■□□□□ 0.15
ERCC4Q92889 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ERCC4Q92889 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC4Q92889 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC4Q92889 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
ERCC4Q92889 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC15.96■□□□□ 0.14
ERCC4Q92889 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ERCC4Q92889 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC4Q92889 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC15.95■□□□□ 0.14
ERCC4Q92889 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 AP000437.1-201ENST00000624057 2085 ntBASIC15.95■□□□□ 0.14
ERCC4Q92889 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ERCC4Q92889 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.95■□□□□ 0.14
ERCC4Q92889 KLF2P4-201ENST00000451959 1225 ntBASIC15.95■□□□□ 0.14
ERCC4Q92889 KRT18P15-201ENST00000458108 1291 ntBASIC15.95■□□□□ 0.14
ERCC4Q92889 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.95■□□□□ 0.14
ERCC4Q92889 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.95■□□□□ 0.14
ERCC4Q92889 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC4Q92889 AC005730.2-201ENST00000564549 1184 ntBASIC15.95■□□□□ 0.14
ERCC4Q92889 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.95■□□□□ 0.14
ERCC4Q92889 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.95■□□□□ 0.14
ERCC4Q92889 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
ERCC4Q92889 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC15.95■□□□□ 0.14
ERCC4Q92889 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms