Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 BRWD1P1-201ENST00000401091 371 ntBASIC12.57□□□□□ -0.4
LRRC28Q86X40 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 ACTBP11-201ENST00000436287 1126 ntBASIC12.57□□□□□ -0.4
LRRC28Q86X40 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 RPL13AP20-201ENST00000459725 609 ntBASIC12.57□□□□□ -0.4
LRRC28Q86X40 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.57□□□□□ -0.4
LRRC28Q86X40 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 ZACNP1-201ENST00000612259 710 ntBASIC12.57□□□□□ -0.4
LRRC28Q86X40 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 AC009542.2-202ENST00000619004 1067 ntBASIC12.57□□□□□ -0.4
LRRC28Q86X40 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 PI4KAP2-201ENST00000360806 2080 ntBASIC12.57□□□□□ -0.4
LRRC28Q86X40 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.57□□□□□ -0.4
LRRC28Q86X40 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LRRC28Q86X40 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 AC008620.2-201ENST00000510294 1569 ntBASIC12.56□□□□□ -0.4
LRRC28Q86X40 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 AP000593.2-201ENST00000542775 1433 ntBASIC12.56□□□□□ -0.4
LRRC28Q86X40 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.56□□□□□ -0.4
LRRC28Q86X40 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 MIR1908-201ENST00000410394 80 ntBASIC12.56□□□□□ -0.4
LRRC28Q86X40 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 AC092658.1-201ENST00000505836 891 ntBASIC12.56□□□□□ -0.4
LRRC28Q86X40 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 AC104506.1-201ENST00000609247 429 ntBASIC12.56□□□□□ -0.4
LRRC28Q86X40 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms