Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 KLF17P1-201ENST00000547105 1126 ntBASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AC079328.1-201ENST00000560358 952 ntBASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AC103691.2-201ENST00000618824 433 ntBASIC13.47□□□□□ -0.25
RNF44Q7L0R7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AC004554.1-201ENST00000422830 1468 ntBASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AC061965.1-201ENST00000560524 1465 ntBASIC13.47□□□□□ -0.25
RNF44Q7L0R7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 KRT8P18-201ENST00000413425 1445 ntBASIC13.47□□□□□ -0.25
RNF44Q7L0R7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
RNF44Q7L0R7 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 AC091046.1-201ENST00000331871 207 ntBASIC13.46□□□□□ -0.25
RNF44Q7L0R7 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 CHCHD2P9-201ENST00000461726 456 ntBASIC13.46□□□□□ -0.25
RNF44Q7L0R7 RN7SL81P-201ENST00000493781 261 ntBASIC13.46□□□□□ -0.25
RNF44Q7L0R7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 ORAOV1P1-201ENST00000503108 395 ntBASIC13.46□□□□□ -0.25
RNF44Q7L0R7 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 AC016629.1-201ENST00000596579 586 ntBASIC13.46□□□□□ -0.25
RNF44Q7L0R7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RNF44Q7L0R7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RNF44Q7L0R7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
RNF44Q7L0R7 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
RNF44Q7L0R7 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms