Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 HNRNPA1P72-201ENST00000529511 967 ntBASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13DQ5THJ4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 HNRNPA1P68-201ENST00000425806 979 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 AL139317.2-201ENST00000556998 158 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 AC022382.1-201ENST00000602768 336 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 AC135506.1-201ENST00000603877 1799 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 TUBA3GP-201ENST00000410028 1325 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 AC009093.9-201ENST00000566038 1611 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 SERPINB8P1-201ENST00000401898 377 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 RN7SL111P-201ENST00000468841 285 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 DERL1-204ENST00000519018 575 ntTSL 4 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 RAB42P1-201ENST00000555078 316 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 ANKRD26P3-201ENST00000454044 2748 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 AL391903.1-201ENST00000407513 365 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 SLC6A6P1-201ENST00000413933 1850 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 OR52X1P-201ENST00000446117 914 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 FAM223B-202ENST00000598177 713 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 FAM223A-202ENST00000625204 713 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 AC023830.3-201ENST00000612995 1455 ntBASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13DQ5THJ4 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 CLK2P1-201ENST00000416636 1294 ntBASIC8.96□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms