Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 AC015656.1-201ENST00000624209 3578 ntBASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 OR7E12P-201ENST00000344740 973 ntBASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 MKL1-204ENST00000402630 747 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 OR52X1P-201ENST00000446117 914 ntBASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 AC104212.2-201ENST00000478813 628 ntBASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 MIR5091-201ENST00000578707 93 ntBASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 AC064850.1-201ENST00000413279 1398 ntBASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 AJ011931.1-201ENST00000618749 2492 ntBASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO4Q2I0M5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 AL591499.1-201ENST00000307155 1153 ntBASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 SRP9P1-201ENST00000445874 261 ntBASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 RN7SL33P-201ENST00000462543 342 ntBASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 AC005332.2-201ENST00000590010 930 ntBASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 AL031768.1-201ENST00000606542 701 ntBASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 MIR6819-201ENST00000622122 61 ntBASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO4Q2I0M5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms