Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABPAQ06546 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GABPAQ06546 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABPAQ06546 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABPAQ06546 SNORA50C-201ENST00000408535 133 ntBASIC16.26■□□□□ 0.19
GABPAQ06546 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.26■□□□□ 0.19
GABPAQ06546 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC16.26■□□□□ 0.19
GABPAQ06546 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.26■□□□□ 0.19
GABPAQ06546 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC16.26■□□□□ 0.19
GABPAQ06546 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABPAQ06546 AC005777.1-201ENST00000588332 187 ntBASIC16.26■□□□□ 0.19
GABPAQ06546 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.26■□□□□ 0.19
GABPAQ06546 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.26■□□□□ 0.19
GABPAQ06546 AC011247.3-201ENST00000603297 438 ntBASIC16.26■□□□□ 0.19
GABPAQ06546 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GABPAQ06546 AC073869.4-201ENST00000620841 800 ntBASIC16.26■□□□□ 0.19
GABPAQ06546 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
GABPAQ06546 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.26■□□□□ 0.19
GABPAQ06546 AC138466.4-201ENST00000623965 852 ntBASIC16.26■□□□□ 0.19
GABPAQ06546 AC026336.4-201ENST00000624565 1050 ntBASIC16.26■□□□□ 0.19
GABPAQ06546 SNORA50.1-201ENST00000628590 135 ntBASIC16.26■□□□□ 0.19
GABPAQ06546 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.26■□□□□ 0.19
GABPAQ06546 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABPAQ06546 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.26■□□□□ 0.19
GABPAQ06546 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.26■□□□□ 0.19
GABPAQ06546 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABPAQ06546 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GABPAQ06546 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABPAQ06546 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.26■□□□□ 0.19
GABPAQ06546 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABPAQ06546 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABPAQ06546 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABPAQ06546 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC16.26■□□□□ 0.19
GABPAQ06546 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.26■□□□□ 0.19
GABPAQ06546 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC16.26■□□□□ 0.19
GABPAQ06546 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
GABPAQ06546 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.25■□□□□ 0.19
GABPAQ06546 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.25■□□□□ 0.19
GABPAQ06546 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.25■□□□□ 0.19
GABPAQ06546 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
GABPAQ06546 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.25■□□□□ 0.19
GABPAQ06546 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
GABPAQ06546 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.25■□□□□ 0.19
GABPAQ06546 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.25■□□□□ 0.19
GABPAQ06546 AC005077.3-201ENST00000449614 213 ntBASIC16.25■□□□□ 0.19
GABPAQ06546 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.25■□□□□ 0.19
GABPAQ06546 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.25■□□□□ 0.19
GABPAQ06546 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.25■□□□□ 0.19
GABPAQ06546 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC16.25■□□□□ 0.19
GABPAQ06546 AC087203.1-201ENST00000532111 1181 ntBASIC16.25■□□□□ 0.19
GABPAQ06546 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.25■□□□□ 0.19
GABPAQ06546 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.25■□□□□ 0.19
GABPAQ06546 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.25■□□□□ 0.19
GABPAQ06546 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
GABPAQ06546 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GABPAQ06546 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 FAM90A21P-201ENST00000510875 1396 ntBASIC16.25■□□□□ 0.19
GABPAQ06546 FAM90A15P-201ENST00000514465 1395 ntBASIC16.25■□□□□ 0.19
GABPAQ06546 FAM90A6P-201ENST00000515148 1394 ntBASIC16.25■□□□□ 0.19
GABPAQ06546 FAM90A16P-201ENST00000526662 1395 ntBASIC16.25■□□□□ 0.19
GABPAQ06546 FAM90A9P-201ENST00000527940 1395 ntBASIC16.25■□□□□ 0.19
GABPAQ06546 FAM90A5P-201ENST00000528738 1395 ntBASIC16.25■□□□□ 0.19
GABPAQ06546 FAM90A14P-201ENST00000530386 1395 ntBASIC16.25■□□□□ 0.19
GABPAQ06546 FAM90A13P-201ENST00000534703 1395 ntBASIC16.25■□□□□ 0.19
GABPAQ06546 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.25■□□□□ 0.19
GABPAQ06546 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABPAQ06546 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABPAQ06546 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABPAQ06546 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GABPAQ06546 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABPAQ06546 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.24■□□□□ 0.19
GABPAQ06546 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
GABPAQ06546 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.24■□□□□ 0.19
GABPAQ06546 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABPAQ06546 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.24■□□□□ 0.19
GABPAQ06546 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GABPAQ06546 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.24■□□□□ 0.19
GABPAQ06546 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABPAQ06546 KRT18P4-201ENST00000422599 1288 ntBASIC16.24■□□□□ 0.19
GABPAQ06546 AC041040.1-201ENST00000425197 460 ntBASIC16.24■□□□□ 0.19
GABPAQ06546 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.24■□□□□ 0.19
GABPAQ06546 RN7SL128P-201ENST00000467883 305 ntBASIC16.24■□□□□ 0.19
GABPAQ06546 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC16.24■□□□□ 0.19
GABPAQ06546 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GABPAQ06546 BAK1P2-201ENST00000532665 631 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms