Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.82□□□□□ -0.04
USP46P62068 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
USP46P62068 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USP46P62068 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USP46P62068 MST1P2-201ENST00000457982 2291 ntBASIC14.82□□□□□ -0.04
USP46P62068 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.82□□□□□ -0.04
USP46P62068 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
USP46P62068 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.82□□□□□ -0.04
USP46P62068 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
USP46P62068 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USP46P62068 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
USP46P62068 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
USP46P62068 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
USP46P62068 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.82□□□□□ -0.04
USP46P62068 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
USP46P62068 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
USP46P62068 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.81□□□□□ -0.04
USP46P62068 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.81□□□□□ -0.04
USP46P62068 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.81□□□□□ -0.04
USP46P62068 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.81□□□□□ -0.04
USP46P62068 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
USP46P62068 AC087386.2-201ENST00000623212 4637 ntBASIC14.81□□□□□ -0.04
USP46P62068 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
USP46P62068 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.81□□□□□ -0.04
USP46P62068 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 RPL17P11-201ENST00000417593 544 ntBASIC14.81□□□□□ -0.04
USP46P62068 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 AL392088.1-201ENST00000428364 670 ntBASIC14.81□□□□□ -0.04
USP46P62068 AC098934.1-203ENST00000442868 1262 ntBASIC14.81□□□□□ -0.04
USP46P62068 RPL7P35-201ENST00000446943 740 ntBASIC14.81□□□□□ -0.04
USP46P62068 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.81□□□□□ -0.04
USP46P62068 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.81□□□□□ -0.04
USP46P62068 AC079112.1-201ENST00000454972 939 ntBASIC14.81□□□□□ -0.04
USP46P62068 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC14.81□□□□□ -0.04
USP46P62068 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.81□□□□□ -0.04
USP46P62068 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.81□□□□□ -0.04
USP46P62068 GOLGA2P8-201ENST00000505201 779 ntBASIC14.81□□□□□ -0.04
USP46P62068 SLC25A15P3-201ENST00000505530 290 ntBASIC14.81□□□□□ -0.04
USP46P62068 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.81□□□□□ -0.04
USP46P62068 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 AP000911.2-201ENST00000534330 502 ntBASIC14.81□□□□□ -0.04
USP46P62068 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.81□□□□□ -0.04
USP46P62068 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.81□□□□□ -0.04
USP46P62068 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
USP46P62068 AC073911.3-201ENST00000624401 631 ntBASIC14.81□□□□□ -0.04
USP46P62068 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.81□□□□□ -0.04
USP46P62068 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 AC068760.1-201ENST00000493579 1953 ntBASIC14.81□□□□□ -0.04
USP46P62068 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.81□□□□□ -0.04
USP46P62068 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.81□□□□□ -0.04
USP46P62068 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USP46P62068 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.81□□□□□ -0.04
USP46P62068 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USP46P62068 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USP46P62068 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.8□□□□□ -0.04
USP46P62068 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USP46P62068 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USP46P62068 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
USP46P62068 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USP46P62068 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
USP46P62068 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USP46P62068 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
USP46P62068 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
USP46P62068 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USP46P62068 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
USP46P62068 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms