Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.07□□□□□ -0.16
AP1S1P61966 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
AP1S1P61966 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.07□□□□□ -0.16
AP1S1P61966 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
AP1S1P61966 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S1P61966 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.07□□□□□ -0.16
AP1S1P61966 EEF1DP2-201ENST00000433698 843 ntBASIC14.07□□□□□ -0.16
AP1S1P61966 RN7SL564P-201ENST00000496309 250 ntBASIC14.07□□□□□ -0.16
AP1S1P61966 KRT8P2-201ENST00000556193 944 ntBASIC14.07□□□□□ -0.16
AP1S1P61966 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S1P61966 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.07□□□□□ -0.16
AP1S1P61966 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.07□□□□□ -0.16
AP1S1P61966 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.07□□□□□ -0.16
AP1S1P61966 AL356740.1-201ENST00000602192 1297 ntBASIC14.07□□□□□ -0.16
AP1S1P61966 AC007881.3-201ENST00000608897 607 ntBASIC14.07□□□□□ -0.16
AP1S1P61966 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
AP1S1P61966 AL805961.1-201ENST00000642026 753 ntBASIC14.07□□□□□ -0.16
AP1S1P61966 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
AP1S1P61966 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S1P61966 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.07□□□□□ -0.16
AP1S1P61966 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S1P61966 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.07□□□□□ -0.16
AP1S1P61966 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.07□□□□□ -0.16
AP1S1P61966 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S1P61966 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AP1S1P61966 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.06□□□□□ -0.16
AP1S1P61966 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S1P61966 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AP1S1P61966 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.06□□□□□ -0.16
AP1S1P61966 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AP1S1P61966 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S1P61966 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 OR2W2P-201ENST00000406313 909 ntBASIC14.06□□□□□ -0.16
AP1S1P61966 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.06□□□□□ -0.16
AP1S1P61966 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.06□□□□□ -0.16
AP1S1P61966 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
AP1S1P61966 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.06□□□□□ -0.16
AP1S1P61966 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.06□□□□□ -0.16
AP1S1P61966 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S1P61966 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.06□□□□□ -0.16
AP1S1P61966 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S1P61966 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S1P61966 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S1P61966 MIR3940-201ENST00000579148 102 ntBASIC14.06□□□□□ -0.16
AP1S1P61966 MIR4326-201ENST00000582203 59 ntBASIC14.06□□□□□ -0.16
AP1S1P61966 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.06□□□□□ -0.16
AP1S1P61966 AP000322.3-201ENST00000608665 388 ntBASIC14.06□□□□□ -0.16
AP1S1P61966 AC091769.1-201ENST00000619576 568 ntBASIC14.06□□□□□ -0.16
AP1S1P61966 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.06□□□□□ -0.16
AP1S1P61966 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.06□□□□□ -0.16
AP1S1P61966 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AP1S1P61966 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AP1S1P61966 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S1P61966 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
AP1S1P61966 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S1P61966 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.06□□□□□ -0.16
AP1S1P61966 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.06□□□□□ -0.16
AP1S1P61966 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S1P61966 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.05□□□□□ -0.16
AP1S1P61966 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms