Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S2P59780 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.07□□□□□ -0.48
AP3S2P59780 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.07□□□□□ -0.48
AP3S2P59780 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.07□□□□□ -0.48
AP3S2P59780 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.07□□□□□ -0.48
AP3S2P59780 KRT18P13-201ENST00000400056 1290 ntBASIC12.07□□□□□ -0.48
AP3S2P59780 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
AP3S2P59780 AL450487.1-201ENST00000426799 995 ntBASIC12.07□□□□□ -0.48
AP3S2P59780 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.07□□□□□ -0.48
AP3S2P59780 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
AP3S2P59780 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.07□□□□□ -0.48
AP3S2P59780 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.07□□□□□ -0.48
AP3S2P59780 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.07□□□□□ -0.48
AP3S2P59780 AC027369.6-201ENST00000525520 931 ntBASIC12.07□□□□□ -0.48
AP3S2P59780 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.07□□□□□ -0.48
AP3S2P59780 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.07□□□□□ -0.48
AP3S2P59780 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.07□□□□□ -0.48
AP3S2P59780 AL844908.2-201ENST00000609461 460 ntBASIC12.07□□□□□ -0.48
AP3S2P59780 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
AP3S2P59780 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
AP3S2P59780 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
AP3S2P59780 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
AP3S2P59780 LAP3P2-201ENST00000454686 1454 ntBASIC12.07□□□□□ -0.48
AP3S2P59780 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S2P59780 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
AP3S2P59780 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC12.07□□□□□ -0.48
AP3S2P59780 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 TRIM80P-201ENST00000455685 2848 ntBASIC12.06□□□□□ -0.48
AP3S2P59780 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
AP3S2P59780 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
AP3S2P59780 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 AP000593.2-201ENST00000542775 1433 ntBASIC12.06□□□□□ -0.48
AP3S2P59780 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
AP3S2P59780 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
AP3S2P59780 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.06□□□□□ -0.48
AP3S2P59780 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 SOCS2P1-201ENST00000417727 557 ntBASIC12.06□□□□□ -0.48
AP3S2P59780 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S2P59780 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
AP3S2P59780 AC011495.1-201ENST00000498085 584 ntBASIC12.06□□□□□ -0.48
AP3S2P59780 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S2P59780 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.06□□□□□ -0.48
AP3S2P59780 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S2P59780 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.06□□□□□ -0.48
AP3S2P59780 SRD5A3P1-201ENST00000603021 949 ntBASIC12.06□□□□□ -0.48
AP3S2P59780 AL390955.2-201ENST00000603032 514 ntBASIC12.06□□□□□ -0.48
AP3S2P59780 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S2P59780 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
AP3S2P59780 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S2P59780 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S2P59780 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms