Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF5P43026 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
GDF5P43026 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF5P43026 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
GDF5P43026 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 TCAF1P1-201ENST00000414990 2232 ntBASIC13.67□□□□□ -0.22
GDF5P43026 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GDF5P43026 AL157791.1-201ENST00000553667 1699 ntBASIC13.67□□□□□ -0.22
GDF5P43026 AC093462.1-201ENST00000621167 1683 ntBASIC13.67□□□□□ -0.22
GDF5P43026 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GDF5P43026 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.67□□□□□ -0.22
GDF5P43026 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
GDF5P43026 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
GDF5P43026 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.67□□□□□ -0.22
GDF5P43026 AL391647.1-201ENST00000395664 511 ntBASIC13.67□□□□□ -0.22
GDF5P43026 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.67□□□□□ -0.22
GDF5P43026 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.67□□□□□ -0.22
GDF5P43026 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.67□□□□□ -0.22
GDF5P43026 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF5P43026 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 AC116345.2-201ENST00000512837 523 ntBASIC13.67□□□□□ -0.22
GDF5P43026 AP001258.2-201ENST00000529891 490 ntBASIC13.67□□□□□ -0.22
GDF5P43026 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
GDF5P43026 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF5P43026 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.67□□□□□ -0.22
GDF5P43026 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF5P43026 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GDF5P43026 MIR6869-201ENST00000619434 62 ntBASIC13.67□□□□□ -0.22
GDF5P43026 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.67□□□□□ -0.22
GDF5P43026 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 COL6A4P2-202ENST00000504443 2753 ntBASIC13.67□□□□□ -0.22
GDF5P43026 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GDF5P43026 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GDF5P43026 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF5P43026 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.67□□□□□ -0.22
GDF5P43026 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF5P43026 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 TUBBP5-203ENST00000508529 1334 ntBASIC13.66□□□□□ -0.22
GDF5P43026 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
GDF5P43026 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF5P43026 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
GDF5P43026 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 AC114271.1-201ENST00000612689 2813 ntBASIC13.66□□□□□ -0.22
GDF5P43026 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
GDF5P43026 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF5P43026 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.66□□□□□ -0.22
GDF5P43026 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.66□□□□□ -0.22
GDF5P43026 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF5P43026 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF5P43026 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.66□□□□□ -0.22
GDF5P43026 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.66□□□□□ -0.22
GDF5P43026 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF5P43026 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.66□□□□□ -0.22
GDF5P43026 KRT8P1-201ENST00000557533 1207 ntBASIC13.66□□□□□ -0.22
GDF5P43026 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.66□□□□□ -0.22
GDF5P43026 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF5P43026 AL021707.6-201ENST00000609212 491 ntBASIC13.66□□□□□ -0.22
GDF5P43026 MEG3_2.1-201ENST00000611456 105 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms